Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_030296.1
Length=5071
Score E
Sequences producing significant alignments: (Bits) Value
SEQ10035 140 1e-29
>SEQ10035
Length=4395
Score = 140 bits (154), Expect = 1e-29
Identities = 269/392 (69%), Gaps = 6/392 (2%)
Strand=Plus/Minus
Query 1760 AATTTAATTTTTGCCGCTCCACTCGGTAACATTCAGGAAACCTACTATACGTTGGACGAG 1819
|||||||||||| |||||| ||||||||||| || ||||||| | | |||||
Sbjct 3056 AATTTAATTTTTAATGCTCCAGAAGGTAACATTCATAAATACTACTATTCTATTAACGAG 2997
Query 1820 TCCGTTGTAATTTTGGAAAAATTGCTACTCTATCAGTATCGTGATGATACGGAAA--TTG 1877
|| || | ||| |||||| | ||||| |||||| | | | | ||| |||| |
Sbjct 2996 TCTGTAGAAATATTGGAAGATTTGCTTAACTATCAATTTTATAACGATCGCGAAAAGATA 2937
Query 1878 TGGAAATTTTTCTCCAGGATCTATATGACGTACTCGAAAAACGTATAGCTaaaaaaaaTA 1937
||||||| || | ||||||| | ||| | || ||| ||| ||||||||||||
Sbjct 2936 ACCGAATTTTTATCAA--CTCTATATAAAGTAATTGACAAATTAATACCTAAAAAAAATA 2879
Query 1938 CCTTTTTTGTTCTCTCCCCATCGAATGCTGGCAAAAATTTTTTCTTCGATTGCATTGTAC 1997
|| |||||||||| || || | ||||| || || |||||||| || ||| || | |
Sbjct 2878 CCATTTTTGTTCTATCACCTCCCAATGCCGGAAAGAATTTTTTTTTTGATACATTTATTC 2819
Query 1998 ATTTTTATTTGAATTTCGGTCTGATCGGTAATTTTAATAAGTACCAAAATTTCCCTTTAC 2057
||| || ||| ||||| || | | || |||||||||| || ||| || |||
Sbjct 2818 ATTATTTTTTAAATTTTGGACAAGTTGGAAATTTTAATAGATATTGTTCTTTTCCATTAA 2759
Query 2058 AAGAGTGTGTTCACAAACGTATTCTTCTGTGGAACGAACCACAAGCTG-AGCCTAGTGCT 2116
|||||||| | | | ||| || | ||||| || ||| | | ||||| |||
Sbjct 2758 TGGAGTGTGTCGAAAGGAGAATTATTTTATGGAATGAGCCAATATTGGAAGCCT-CAGCT 2700
Query 2117 TTTGAAACTCTGAAAACGTTACTCGGAGGCGA 2148
|||||| |||||| |||| ||||||| ||
Sbjct 2699 ACTGAAACATTGAAAATGTTATTCGGAGGAGA 2668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16107073532700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |