Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_030296.1 Length=5071 Score E Sequences producing significant alignments: (Bits) Value SEQ10035 140 1e-29 >SEQ10035 Length=4395 Score = 140 bits (154), Expect = 1e-29 Identities = 269/392 (69%), Gaps = 6/392 (2%) Strand=Plus/Minus Query 1760 AATTTAATTTTTGCCGCTCCACTCGGTAACATTCAGGAAACCTACTATACGTTGGACGAG 1819 |||||||||||| |||||| ||||||||||| || ||||||| | | ||||| Sbjct 3056 AATTTAATTTTTAATGCTCCAGAAGGTAACATTCATAAATACTACTATTCTATTAACGAG 2997 Query 1820 TCCGTTGTAATTTTGGAAAAATTGCTACTCTATCAGTATCGTGATGATACGGAAA--TTG 1877 || || | ||| |||||| | ||||| |||||| | | | | ||| |||| | Sbjct 2996 TCTGTAGAAATATTGGAAGATTTGCTTAACTATCAATTTTATAACGATCGCGAAAAGATA 2937 Query 1878 TGGAAATTTTTCTCCAGGATCTATATGACGTACTCGAAAAACGTATAGCTaaaaaaaaTA 1937 ||||||| || | ||||||| | ||| | || ||| ||| |||||||||||| Sbjct 2936 ACCGAATTTTTATCAA--CTCTATATAAAGTAATTGACAAATTAATACCTAAAAAAAATA 2879 Query 1938 CCTTTTTTGTTCTCTCCCCATCGAATGCTGGCAAAAATTTTTTCTTCGATTGCATTGTAC 1997 || |||||||||| || || | ||||| || || |||||||| || ||| || | | Sbjct 2878 CCATTTTTGTTCTATCACCTCCCAATGCCGGAAAGAATTTTTTTTTTGATACATTTATTC 2819 Query 1998 ATTTTTATTTGAATTTCGGTCTGATCGGTAATTTTAATAAGTACCAAAATTTCCCTTTAC 2057 ||| || ||| ||||| || | | || |||||||||| || ||| || ||| Sbjct 2818 ATTATTTTTTAAATTTTGGACAAGTTGGAAATTTTAATAGATATTGTTCTTTTCCATTAA 2759 Query 2058 AAGAGTGTGTTCACAAACGTATTCTTCTGTGGAACGAACCACAAGCTG-AGCCTAGTGCT 2116 |||||||| | | | ||| || | ||||| || ||| | | ||||| ||| Sbjct 2758 TGGAGTGTGTCGAAAGGAGAATTATTTTATGGAATGAGCCAATATTGGAAGCCT-CAGCT 2700 Query 2117 TTTGAAACTCTGAAAACGTTACTCGGAGGCGA 2148 |||||| |||||| |||| ||||||| || Sbjct 2699 ACTGAAACATTGAAAATGTTATTCGGAGGAGA 2668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16107073532700