Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28]
61,434 sequences; 410,872,512 total letters
Query= NC_022790.1
Length=4129
Score E
Sequences producing significant alignments: (Bits) Value
seq61318 113 1e-21
seq14808 95.1 3e-16
seq31519 89.7 1e-14
seq30888 89.7 1e-14
seq23138 77.0 8e-11
>seq61318
Length=2697
Score = 113 bits (124), Expect = 1e-21
Identities = 214/313 (68%), Gaps = 4/313 (1%)
Strand=Plus/Minus
Query 1066 ACTGATGCAACAACACCGCAAGGTAACTTATCGGCCATAGGTACAACGGTACTT--AGTG 1123
|||||||| ||||| || |||||||| || | || || ||||| ||| ||| ||||
Sbjct 2263 ACTGATGCTACAACTCCTCAAGGTAATTTGGCTGCTATTGGTACT--GGTTCTTTTAGTG 2206
Query 1124 GCCACTCTTTTACAAAGAGTTTCACTGAACATACAATAGTAATAGGTATGGTATCTGTAA 1183
| || |||||| || |||||| || || || | || || | || ||||| |
Sbjct 2205 GTCATGGTTTTACTAAATCTTTCACCGAGCACTGTATCATCATTGGCCTTGTTTCTGTTA 2146
Query 1184 GAACAGATTTAACATACCAACAAGGACTGAACAGAATGTTTAGTAGAGAAACAATATACG 1243
| |||| | || || |||||||| |||| ||||||| || ||| || | || |
Sbjct 2145 GGGCAGACCTGACCTATCAACAAGGGTTGAATAGAATGTGGAGCAGACAAGGACGTTATG 2086
Query 1244 ATTACTACTGGCCAACCCTTTCAACGATTGGCGAACAAGCAGTCAAAAACAAAGAAATAT 1303
||| ||||||||| | ||| | |||| || || || || || || ||||| |
Sbjct 2085 ATTTTTACTGGCCAGCGCTTGCCCATCTTGGTGAGCAGGCCGTACTTAATAAGGAAATTT 2026
Query 1304 ACGCACAAGGAAGTGCAGCCGACGAAACTACGTTCGGCTATCAAGAGCGTTATGCGGAAT 1363
|||| ||||| | | || || || | ||| || ||||| || || ||||||||||
Sbjct 2025 ACGCTCAAGGTAATAGTGCTGATGAGGATGTGTTTGGTTATCAGGAACGGTATGCGGAAT 1966
Query 1364 ATAGATACAAGCC 1376
|||| || |||||
Sbjct 1965 ATAGGTATAAGCC 1953
>seq14808
Length=1530
Score = 95.1 bits (104), Expect = 3e-16
Identities = 317/486 (65%), Gaps = 18/486 (4%)
Strand=Plus/Plus
Query 933 CGGTTCAAGATATATCGAAGTAATAAAAAATCATTTTAACGTAACTAGCCCAGATGCTAG 992
|||| || | ||||||||| | || ||| ||||| |||||| || ||||| |
Sbjct 1037 CGGTACACGGTATATCGAAATCATCAAAGCCCATTTCGGCGTAACGTCACCTGATGCCCG 1096
Query 993 ATTACAACGACCAGAATATCTTGGTGGCGGAAGCTCACCGGTAAATATCAGTCCGGTCGC 1052
| | ||||| || ||||| ||||| ||||| || | | ||||| || || || |
Sbjct 1097 ACTTCAACGCCCTGAATACCTTGGCGGCGGTTCTTCCCGTATCAATATTAGCCCTGTTCC 1156
Query 1053 ACAAACATCGTCAACTGATGCAACAACACCGCAAGGTAA-CTTATCGGCCATAGGTACAA 1111
|||||| ||||| |||| |||| || ||||||||||| ||| ||| | | |||||
Sbjct 1157 ACAAACGTCGTCTTCTGACACAACCACTCCGCAAGGTAATCTTGCCGG-CTTCGGTACGG 1215
Query 1112 CGGTACTTAGTGGCCACTCTTTTACAAAGAGTTTCACTGAACA----TACAATAGTAATA 1167
| | | | ||| || ||||| ||||||||| || ||| | ||
Sbjct 1216 TCGGATTCGACCGGCACGGGTTCACAAAATCTTTCACTGAGCACGGTCACA----TTATC 1271
Query 1168 GGTATGGTATCTGTAAGAACAGATTTAACATACCAACAAGGACTGAACAGAATGTTTAGT 1227
|| | | | || | | ||| | || || |||||||| || ||| | |||| |
Sbjct 1272 GGCCTTGCCTGCGTTCGGGCCGATCTCACGTATCAACAAGGCCTCAACCGTATGTGGTCT 1331
Query 1228 AG--AGAAACAATATACGATTACTACTGGCCAACCCTTTCAACGATTGGCGAACAAGCAG 1285
| || | | ||||| | ||||||||| | ||| | | |||||||| | |
Sbjct 1332 CGCCAGGACC--GGTACGACTTCTACTGGCCTGCGCTTGCCCACCTGGGCGAACAGCCCG 1389
Query 1286 TCAAAAACAAAGAAATATACGCACAAGGAAGTGCAGCCGACGA--AACTACGTTCGGCTA 1343
| ||||| ||||| || || ||||| | || ||||| || || | |||||||||
Sbjct 1390 TTCTCAACAAGGAAATCTATGCTCAAGGCACAGCCGCCGATGAGGAAGT--GTTCGGCTA 1447
Query 1344 TCAAGAGCGTTATGCGGAATATAGATACAAGCCAAGTTCTGTAACTGGCAAATTCCGTTC 1403
|| |||||||| |||||||| | || || || | |||| || |||||||||
Sbjct 1448 CCAGGAGCGTTACGCGGAATACCGGTATAAACCGTCTCAAATAACAGGTGCATTCCGTTC 1507
Query 1404 AAACGC 1409
||| ||
Sbjct 1508 AAATGC 1513
>seq31519
Length=4884
Score = 89.7 bits (98), Expect = 1e-14
Identities = 183/270 (68%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 1051 GCACAAACATCGTCAACTGATGCAACAACACCGCAAGGTAACTTATCGGCCATAGGTACA 1110
|| |||||||| || || ||| | ||||| || ||||||||| || | || || |||||
Sbjct 2424 GCTCAAACATCATCCACCGATTCTACAACCCCACAAGGTAACCTAGCTGCTATGGGTAC- 2366
Query 1111 ACGGTACT--TAGTGGCCACTCTTTTACAAAGAGTTTCACTGAACATACAATAGTAATAG 1168
|| |||| | ||| || || ||||| || || || ||| | | | |
Sbjct 2365 -CGTTACTGTTTCTGGACATGGATTCACAAAATCCTTTACGGAGCATTGTGTTATCCTGG 2307
Query 1169 GTATGGTATCTGTAAGAACAGATTTAACATACCAACAAGGACTGAACAGAATGTTTAGTA 1228
| |||||| ||| | |||| | || ||||||||||| | ||||||||||||||
Sbjct 2306 GAATGGTAAATGTTCGTGCAGACATTACCTACCAACAAGGCTTAAACAGAATGTTTAGCC 2247
Query 1229 GAGAAACAATATACGATTACTACTGGCCAACCCTTTCAACGATTGGCGAACAAGCAGTCA 1288
| ||| | | || || || ||||| | ||| | | || || |||||| ||
Sbjct 2246 GGCGAACTAGGTGGGACTATTATTGGCCTTCTCTTGCCCACCTAGGTGAGCAAGCAATCC 2187
Query 1289 AAAACAAAGAAATATACGCACAAGGAAGTG 1318
||||| |||||||| |||||||||||||
Sbjct 2186 TCAACAAGGAAATATATGCACAAGGAAGTG 2157
>seq30888
Length=1567
Score = 89.7 bits (98), Expect = 1e-14
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 943 TATATCGAAGTAATAAAAAATCATTTTAACGTAACTAGCCCAGATGCTAGATTACAACGA 1002
|| || ||| | || ||| ||| || |||||| || |||||| || | |||||
Sbjct 1321 TACATTGAAATCATCAAAGCTCACTTCGGCGTAACCTCACCTGATGCTCGACTGCAACGC 1380
Query 1003 CCAGAATATCTTGGTGGCGGAAGCTCACCGGTAAATATCAGTCCGGTCGCACAAACATCG 1062
|| ||||| ||||| ||||| |||| | |||||||||||||| ||||||| |||
Sbjct 1381 CCTGAATACCTTGGCGGCGGTTCTTCACGTATCAATATCAGTCCGGTGCCACAAACGTCG 1440
Query 1063 TCAACTGATGCAACAACACCGCAAGGTAA 1091
|| |||| |||| || |||||||||||
Sbjct 1441 TCTTCTGACACAACCACCCCGCAAGGTAA 1469
>seq23138
Length=2236
Score = 77.0 bits (84), Expect = 8e-11
Identities = 271/411 (66%), Gaps = 32/411 (8%)
Strand=Plus/Plus
Query 982 CCAGATGCTAGATTACAACGACCAGAATATCTTGGTGGCGGAAGCTCA--CCG-GTAAAT 1038
|| ||||| || ||||||| || ||||| |||||||| ||| ||| ||| || |||
Sbjct 960 CCTGATGCGAGGCTACAACGTCCTGAATACCTTGGTGGAGGA---TCAACCCGTGTCAAT 1016
Query 1039 ATCAGTCCGGTCGCACAAACATCGTCAACTGATGCAACAACACCGCAAGGTAACTTATCG 1098
| || || | ||||| || || || ||||| || || || || || || | |
Sbjct 1017 GTTTCGCCTGTTCCTCAAACTTCTTCTACAGATGCGACCACTCCCCAGGGCAATCTTGCT 1076
Query 1099 GCCATAGGTACAA-CGGTACTTAG-TGGCCACTCTTTTACAAAGAGTTTCACTGAACAT- 1155
|| | ||||| |||| || | | |||| |||||| ||| |||||| |||||
Sbjct 1077 GCTTTCGGTACTGTCGGT--TTCGATCGCCATGGTTTTACTAAGTCTTTCACCGAACACG 1134
Query 1156 ---ACAATAGTAATAGGTATGGTATCTGTAAGAACAGATTTAACATACCAACAAGGACTG 1212
||| | || || || | | ||| ||| | ||| | || || || ||||||||
Sbjct 1135 GTCACA----TCATTGGAATTGCGTGTGTTAGAGCCGATCTTACCTATCAGCAAGGACTA 1190
Query 1213 AACAGAATGTTTAGTAG--AGAAACAATATACGATTACTACTGGCCAACCCTT--TCAAC 1268
||| | |||| | | || | | ||| |||| || ||||| | ||| ||| |
Sbjct 1191 AACCGGATGTGGTCTCGCCAGGACCGGTAT--GATTTTTATTGGCCTGCACTTGCTCACC 1248
Query 1269 GATTGGCGAACAAGCAGTCAAAAACAAAGAAATATACGCACAAGG---AAGTGCAGCCGA 1325
| ||||||||||| || || || ||||| || |||||||| ||| | | |||
Sbjct 1249 --TGGGCGAACAAGCCGTACTGAATAAGGAAATTTATGCACAAGGCACAAGCGATGACGA 1306
Query 1326 CGAAACTACGTTCGGCTATCAAGAGCGTTATGCGGAATATAGATACAAGCC 1376
|||| ||| ||||| || || || || |||||||| | ||||| ||
Sbjct 1307 CGAA---GTGTTTGGCTACCAGGAACGGTACGCGGAATACCGCTACAAACC 1354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13091997122140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |