Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_026278.1 Length=2846 Score E Sequences producing significant alignments: (Bits) Value seq61331 132 9e-28 >seq61331 Length=2812 Score = 132 bits (146), Expect = 9e-28 Identities = 259/374 (69%), Gaps = 18/374 (5%) Strand=Plus/Minus Query 1605 TAATTACTTGTAATA-ATAA-ACTTTTTCGGACGAATATTAATAGCATAACCCTTAGTTT 1662 ||||| || |||||| ||| |||||| |||||||| | |||||| ||||||||| | Sbjct 895 TAATTGCTCGTAATACATATCACTTTT--GGACGAATGTGAATAGCTCCACCCTTAGTCT 838 Query 1663 CAGCTATAAAGGCATACTTGTCTGCCCATATTTTTAAATGATGACCTAATTGCTTGCTAT 1722 | || | ||| ||||| || | |||||| || || |||||| | | |||||||| Sbjct 837 CTGCAAGAAAACTGTACTTATCAGTCCATATCTTCAATAAATGACCAAGCTCCTTGCTAT 778 Query 1723 CGAAGTCATCCAAAATCACAAAATCTTCGTTTTGATAACCACACCACCACTTGTTCTGCA 1782 | || ||||| | || || |||||| |||||| ||| ||||||||| ||||||| Sbjct 777 CAAAATCATCAAGTATAACGTTTTCTTCGCCTTGATATCCATCCCACCACTTATTCTGCA 718 Query 1783 TCTTCATATAGGCTCCAGGA---AATTCAGATCTTGCACGATGACTTTTGCCAACACCTG 1839 |||| | ||| || |||||| |||||| | ||| |||||| || ||| || | Sbjct 717 TCTTAAAATATGCACCAGGATACAATTCA---CGAGCAACATGACTCTTCCCACTTCCAG 661 Query 1840 GAGG-CCCGTAATACCATATACCACACACAGCATCTAAGTTTTCAGCTGG---TTTCATA 1895 |||| || || || |||||| || ||| |||| | | ||| |||| |||||| Sbjct 660 GAGGACCGGTGAT-CCATATGCCTGTAACACCATCCA---TATCATCTGGCTTATTCATA 605 Query 1896 TTATCCTTTGCTATTGTTTTGAGAGTATTGTAGTATTTGATATATACATCATCTGGAACA 1955 | |||||| |||| || | ||| || || | ||||||| ||||| || | Sbjct 604 TGATCCTTCTTTATTTCCTTCAAAGTGCGATAATACCTTATATATATGTCATCAGGCATC 545 Query 1956 CCATCAATATTTCC 1969 | |||| ||| || Sbjct 544 TCTTCAAAATTACC 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8989155815910