Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_027636.1 Length=4501 Score E Sequences producing significant alignments: (Bits) Value seq10870 179 1e-41 seq42511 156 1e-34 seq45297 136 1e-28 seq39822 129 2e-26 seq24598 127 6e-26 seq46004 123 7e-25 seq44242 113 1e-21 seq30888 111 4e-21 seq37428 105 2e-19 seq61403 98.7 3e-17 seq38653 93.3 1e-15 seq59689 87.8 5e-14 seq31691 80.6 8e-12 >seq10870 Length=2260 Score = 179 bits (198), Expect = 1e-41 Identities = 206/276 (75%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 43 GTTCCCAAAGCGGATATTCCGCGTTCGTCGTTTGATAATTCAGACTACTCACAAGACTAC 102 ||||| || || || ||||| || ||||| |||||| ||| | | || || ||||| Sbjct 2234 GTTCCGAAGGCAGAGATTCCCCGCTCGTCCTTTGATCGTTCCCA-TGGTCTAAAAACTAC 2176 Query 103 GTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGCGATACTTT 162 ||||||||| ||| | |||||||||||| ||| |||||| | ||||| || ||||| || Sbjct 2175 GTTTGACGCTGGTAAGCTGATTCCTATTTTTGTGGATGAGGTGCTTCCTGGTGATACGTT 2116 Query 163 TAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTGATGGATAA 222 ||| ||| | ||||| | |||| || |||| || || | ||| |||||||||| Sbjct 2115 TAACTTGAATATGACCGGTTTTGGCCGGTTGGCTACGCCTCTTCATCCTGTGATGGATAA 2056 Query 223 TTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATTCATTGGAA 282 | ||| | |||| ||||||| || || ||||| ||||| ||||| ||| | ||||| | Sbjct 2055 TATGTTCTTGGAGACGTTTTTCTTTTTCGTTCCAAATCGATTGGTCTGGGATAATTGGGA 1996 Query 283 GCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 |||||| ||||||||| |||||| || ||||| Sbjct 1995 AAAGTTCAACGGTGAGCAGACTAATCCCGGCGATTC 1960 Score = 84.2 bits (92), Expect = 6e-13 Identities = 170/250 (68%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 1135 CGGTTTTACTCAGTCCTTCACAGAACACGGGTACGTTATTGGGCTCGTTGCTGTCCGGGC 1194 |||||||||| |||| ||||| || || || | | ||||| || | | ||| ||||| Sbjct 1203 CGGTTTTACTAAGTCTTTCACCGAGCATGGTCATATCATTGGTCTTGCTTGTGTTCGGGC 1144 Query 1195 GGATTTGACCTATCAGCAGGGTCTTCGGAAGCTT---TGGTCTCGTTCTACCCGTTATGA 1251 || |||| |||||||| ||| | ||| | | ||||| || |||||||| Sbjct 1143 AGACCTGACTTATCAGCAAGGTTT---GAACCGTATGTGGTCCCGCCAGGATCGTTATGA 1087 Query 1252 TTACTATTTTCCTGCGTTCGCGATGCTCGGTGAGCAAGCTGTTTTGAACAAGGAGATTTA 1311 || ||| | || || | || || |||||||| || || ||||| ||||||||||| Sbjct 1086 TTTCTACTGGCCCGCTCTTGCTCATCTGGGTGAGCAGGCGGTATTGAATAAGGAGATTTA 1027 Query 1312 TTGTGATGG---GTCTGCCAATGACCCTCTTGTTTTTGGGTATCAGGAGCGTTGGGCTGA 1368 | | || |||| || |||| | || || || ||||| ||||| | ||||| Sbjct 1026 TGCGCAAGGTACGTCTACCGATGA---TGAAGTGTTCGGTTATCAAGAGCGGTACGCTGA 970 Query 1369 GTATCGTTAT 1378 || |||||| Sbjct 969 ATACCGTTAT 960 >seq42511 Length=5077 Score = 156 bits (172), Expect = 1e-34 Identities = 201/276 (73%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 43 GTTCCCAAAGCGGATATTCCGCGTTCGTCGTTTGATAATTCAGACTACTCACAAGACTAC 102 || || ||||| || || |||||||||||||||||| ||| || | || ||||| Sbjct 852 GTCCCTAAAGCTGAAATCCCGCGTTCGTCGTTTGATCGTTCTCACGGTTTGAAA-ACTAC 794 Query 103 GTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGCGATACTTT 162 |||||||| || | ||||||||||||| | ||||||| ||||||| |||||||| || Sbjct 793 ATTTGACGCTGGACAGTTGATTCCTATTTTTTGTGATGAGGTTCTTCCAGGCGATACCTT 734 Query 163 TAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTGATGGATAA 222 |||| | | ||||| | |||| |||| | || || || | ||| | |||||||| Sbjct 733 TAATCTTAATATGACGGGTTTTGGGCGTCTTGCTACGCCTCTTCACCCGATCATGGATAA 674 Query 223 TTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATTCATTGGAA 282 | |||| | || | ||||| || |||||||| |||||| | |||||| | ||| | Sbjct 673 TATGTATCTTGAGACCTTTTTCTTTTTTGTTCCAAATCGTCTAGTTTGGGACAACTGGGA 614 Query 283 GCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 |||| | ||||||||| ||||| || ||||| Sbjct 613 AAAGTTTAACGGTGAGCAGACAAATCCAGGCGATTC 578 >seq45297 Length=4191 Score = 136 bits (150), Expect = 1e-28 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101 ACGTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGCGATACT 160 || |||||||| || | ||||||| ||||||||||| ||| ||||| || ||||| Sbjct 529 ACCTTTGACGCTGGAAAGCTGATTCCGATTTATGTTGACGAGGCGCTTCCAGGTGATACG 470 Query 161 TTTAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTGATGGAT 220 || || || | ||| ||||||||||||||||||| || || || ||| |||||||| Sbjct 469 TTCAACATGAACATGTCTGCGTTTGCGCGTATGGCCACGCCACTGCACCCGGTGATGGAT 410 Query 221 AATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATTCATTGG 280 ||| | || | || | || |||||| ||||| |||| |||| ||| | | ||| Sbjct 409 AATATTTATTTAGAGACTTTCTTTTTCGCCGTTCCTTATCGACTGGTATGGGATAACTGG 350 Query 281 AAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 | |||||| ||||| |||| |||||| |||||||| Sbjct 349 GAAAAGTTCAACGGTGAACAGGTTAATCCAGGTGATTC 312 >seq39822 Length=5133 Score = 129 bits (142), Expect = 2e-26 Identities = 175/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 95 AAGACTACGTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGC 154 || || |||||||| | || ||| | | ||| ||| ||||||||| || | ||||| Sbjct 1994 AAAACAACGTTTGATTCTGGATATCTTGTGCCTGTTTTTGTTGATGAAGTTTTGCCCGGG 2053 Query 155 GATACTTTTAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTG 214 ||||||||||| | | | |||| ||||| ||| | || ||||| || || | Sbjct 2054 GATACTTTTAAAGTTAATCTTACTGGTTTTGCTCGTCTTGCTACTCCCACTTTCCCTATA 2113 Query 215 ATGGATAATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATT 274 ||||||||| ||| |||||| | || ||||| |||||| ||||| | |||||| | Sbjct 2114 ATGGATAATATGTTTATGGATACCTTCTTTTTTGCGGTTCCGTATCGTCTTGTTTGGGGT 2173 Query 275 CATTGGAAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTCGATTTCTTACACTGTT 334 ||||| || |||| || ||||||| ||||||||| ||| ||| ||||||||| Sbjct 2174 AATTGGCAGAAGTTTTGTGGAGAGCAGGTTAATCCTGGGGATAGTATTGATTACACTGTC 2233 Query 335 CCTA 338 |||| Sbjct 2234 CCTA 2237 >seq24598 Length=1619 Score = 127 bits (140), Expect = 6e-26 Identities = 163/224 (73%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 95 AAGACTACGTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGC 154 |||||| | |||||||| || | |||||| | |||| |||||| | ||||| ||| Sbjct 988 AAGACTTCATTTGACGCTGGAAAATTGATTACGATTTTCTGTGATGAAGTGCTTCCAGGC 929 Query 155 GATACTTTTAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTG 214 ||||| || || ||| | ||||||| || | ||| | || || || | |||| | Sbjct 928 GATACCTTCAACTTGAATATGACTGGTTTCGGACGTCTTGCCACACCTCTTCATCCGATC 869 Query 215 ATGGATAATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATT 274 ||||||||| ||||| |||| |||| || || || ||||| ||||| | ||||||| | Sbjct 868 ATGGATAATATGTACCTGGAAACGTTCTTCTTTTTCGTTCCAAATCGNT-GGTTTGGGAT 810 Query 275 CATTGGAAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 ||||| | |||| | |||||||||||||| || || || || Sbjct 809 AATTGGGAAAAGTTTAACGGTGAGCAGGATAACCCCGGGGACTC 766 >seq46004 Length=1132 Score = 123 bits (136), Expect = 7e-25 Identities = 154/207 (74%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 54 GGATATTCCGCGTTCGTCGTTTGATAATTCAGACTACTCACAAGACTACGTTTGACGCCG 113 |||||| ||||| || |||||||||| || | | || || || ||||||| || | Sbjct 448 GGATATCCCGCGGTCTTCGTTTGATAGATCGCA-TGGTCTAAAAACCGCGTTTGATGCGG 506 Query 114 GTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGCGATACTTTTAATTTGCAGA 173 |||||| || ||||||| |||||||| ||| | ||||||||||| || ||| || | Sbjct 507 ATTATTTAATACCTATTTTGGTTGATGATATTTTGCCCGGCGATACGTTCAATGTGGA-T 565 Query 174 TGAC-TGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTGATGGATAATTTGTACATG 232 || | | ||||| || ||||||| || ||| |||| | ||||| ||| |||||||| Sbjct 566 TGTCATTTTTTTGCTCGGTTGGCGACGCCTTTGCATCCGATTATGGACAATATGTACATG 625 Query 233 GATTCGttttttttCTTTGTTCCGAAT 259 || ||||||| || ||||| ||| || Sbjct 626 GAGACGTTTTTCTTTTTTGTGCCGTAT 652 >seq44242 Length=1538 Score = 113 bits (124), Expect = 1e-21 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 122 ATTCCTATTTATGTTGATGAGATTCTTCCCGGCGATACTTTTAATTTGCAGATGACTGCG 181 |||||||| | ||||| || | || || || ||||| || || || | ||||| | Sbjct 941 ATTCCTATCTTCGTTGACGAAGTCCTCCCAGGTGATACGTTCAACCTGAACATGACCGGT 1000 Query 182 TTTGCGCGTATGGCGACTCCGTTGTTTCCGTTGATGGATAATTTGTACATGGATTCGttt 241 || | ||| | || || || || |||| ||||||||| ||||| |||| ||||| Sbjct 1001 TTCGGACGTCTTGCTACCCCACTGCATCCGACCATGGATAATATGTACTTGGAGACGTTT 1060 Query 242 tttttCTTTGTTCCGAATCGTTTGGTTTGGATTCATTGGAAGCAGTTCATGGGTGAGCAG 301 || || || ||||||||||| ||||||||| | ||||| || |||| | || |||| Sbjct 1061 TTCTTTTTCGTTCCGAATCGATTGGTTTGGGATAATTGGGAGAAGTTTAACGGACAGCAA 1120 Query 302 GATAATCCTGGTGATTC 318 ||| ||||||| ||||| Sbjct 1121 GATGATCCTGGCGATTC 1137 >seq30888 Length=1567 Score = 111 bits (122), Expect = 4e-21 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 95 AAGACTACGTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGC 154 || || || || ||| ||||| | | || || |||| ||| |||||| | || || || Sbjct 505 AAAACCACATTCGACTCCGGTAAGCTCATCCCCATTTTTGTGGATGAGGTACTGCCTGGT 564 Query 155 GATACTTTTAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTG 214 || || || || || | ||||| | || | || | ||||| || || ||| || Sbjct 565 GACACGTTCAACCTGAATATGACCGGCTTCGGCCGGCTTGCGACGCCACTGCATCCAGTG 624 Query 215 ATGGATAATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATT 274 ||||| ||| |||| |||| ||||||| || || ||||| || ||| |||||||| | Sbjct 625 ATGGACAATATGTATCTGGAAACGTTTTTCTTTTTCGTTCCAAACCGTCTGGTTTGGGAT 684 Query 275 CATTGGAAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 | ||| || ||| | ||||||||||||||||| || ||||| Sbjct 685 AACTGGGAGAGGTTTAACGGTGAGCAGGATAATCCCGGCGATTC 728 Score = 78.8 bits (86), Expect = 3e-11 Identities = 119/168 (71%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 853 CCAG-GCTACCGCTGCAACAATTAATCAGCTCCGGCAGTCGTTTCAGATACAGAAGCTTT 911 |||| || |||||||| || || || | ||||| | |||| ||| | ||||| | Sbjct 1232 CCAGTGCCACCGCTGCGACGATCAACGACCTCCGCGAAGCGTTCCAGGTTCAGAAAATGC 1291 Query 912 TAGAAAGGGATGCTCGTGGTGGAACACGATATACAGAGATTGTGCGATCTCACTTCGGCG 971 | ||| | |||||||| ||| || || || | || || | | |||||||||||| Sbjct 1292 TCGAACGCGATGCTCGCTCTGGTACTCGGTACATTGAAATCATCAAAGCTCACTTCGGCG 1351 Query 972 TTATCAGCCCGGATGCTCGCTTGCAACGACCCGAGTACCTTGGCGGCG 1019 | | | || |||||||| ||||||| || || ||||||||||||| Sbjct 1352 TAACCTCACCTGATGCTCGACTGCAACGCCCTGAATACCTTGGCGGCG 1399 >seq37428 Length=1593 Score = 105 bits (116), Expect = 2e-19 Identities = 163/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 28 CATCGTTTTGCGATGGTTCCCAAAGCGGATATTCCGCGTTCGTCGTTTGATAATTCAGAC 87 ||| |||||||| || || | |||||| || || || || || |||| || || Sbjct 687 CATAGTTTTGCGGAAGTCCCACGGGTGGATATCCCACGGTCTTCATTCGATAGATCGCAC 746 Query 88 TACTCACAAGACTACGTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCT 147 || || ||| |||||||||| | |||| | || || |||| |||||||| ||| | Sbjct 747 GG-TCTAAAAACTGCGTTTGACGCTGATTATCTAATACCGATTTTGGTTGATGATATTTT 805 Query 148 TCCCGGCGATACTTTTAATTTGCAGATGAC-TGCGTTTGCGCGTATGGCGACTCCGTTGT 206 || || ||||| || || || | || | | |||||||| |||||||||||||| Sbjct 806 GCCGGGTGATACGTTCAACGTGGAT-TGTCATTTTTTTGCGCGGTTGGCGACTCCGTTGC 864 Query 207 TTCCGTTGATGGATAATTTGTACATGGATTCGttttttttCTTTGTTCC 255 ||| | ||||| |||||||| ||||| ||||||| || || ||||| Sbjct 865 AGCCGATTATGGACAATTTGTATATGGAAACGTTTTTCTTTTTCGTTCC 913 >seq61403 Length=4343 Score = 98.7 bits (108), Expect = 3e-17 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 97 GACTACGTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGCGA 156 ||| || || |||| |||||| || | || ||| ||| ||||| | || || || || Sbjct 340 GACCACATTCGACGGTGGTTATCTGGTGCCGTTTTTTGTCGATGAAGTGCTGCCTGGTGA 399 Query 157 TACTTTTAATTTGCAGATGACTGCGTTT-GCGCGTATGGCGACTCCGTTGTTTCCGTTGA 215 ||| ||||| |||| | | | |||| || || ||||||| || | ||| ||| Sbjct 400 TACGTTTAAGTTGC-GCTCGCACGGTTTCGCACGGTTGGCGACCCCTATTAAGCCGGTGA 458 Query 216 TGGATAATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATTC 275 |||||||| |||| ||||| |||||| ||| || || || | ||| || ||||| | Sbjct 459 TGGATAATATGTATATGGACACGTTTTATTTTTTCGTGCCCACTCGGTTACTTTGGGATA 518 Query 276 ATTGGAAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 ||||| ||| || ||||| |||| || ||||| | ||||| Sbjct 519 ATTGGCCGCATTTTATGGGCGAGCGTGAGAATCCCGACGATTC 561 >seq38653 Length=1141 Score = 93.3 bits (102), Expect = 1e-15 Identities = 187/276 (68%), Gaps = 1/276 (0%) Strand=Plus/Plus Query 43 GTTCCCAAAGCGGATATTCCGCGTTCGTCGTTTGATAATTCAGACTACTCACAAGACTAC 102 ||||| ||||| || ||||| ||||| || || | ||| || | || || || Sbjct 541 GTTCCGAAAGCCGAAATTCCACGTTCCTCTTTCAACCGTTCTCACGG-TATGAAAACCAC 599 Query 103 GTTTGACGCCGGTTATTTGATTCCTATTTATGTTGATGAGATTCTTCCCGGCGATACTTT 162 |||||| ||||| | | ||||| || | | || || ||||||| |||||||| || Sbjct 600 GTTTGATGCCGGGAAACTCATTCCGATCTTTTGCGACGAAGTTCTTCCTGGCGATACGTT 659 Query 163 TAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGTTTCCGTTGATGGATAA 222 ||| || ||||| | || | ||| | || ||||| ||| || | ||||| || Sbjct 660 TAACCTGAGCATGACCGGTTTCGGGCGGCTTGCCACTCCATTGCACCCTGTTATGGACAA 719 Query 223 TTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGATTCATTGGAA 282 |||| |||| ||||||| || || || || || || | |||||| | ||||| | Sbjct 720 CATGTATTTGGAAACGTTTTTCTTTTTCGTGCCAAACCGGCTTGTTTGGGATAATTGGGA 779 Query 283 GCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 |||| | || |||||| | | ||||||||||| Sbjct 780 AAAGTTTAATGGCGAGCAGACTGACCCTGGTGATTC 815 >seq59689 Length=1391 Score = 87.8 bits (96), Expect = 5e-14 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 213 TGATGGATAATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGGTTTGGA 272 ||||||||||| ||| | |||| ||||||| || || ||||| |||||| |||||||| Sbjct 1173 TGATGGATAATATGTTCTTGGAGACGTTTTTCTTTTTCGTTCCCAATCGTCTGGTTTGGG 1114 Query 273 TTCATTGGAAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 | ||||| | |||||| ||||||||| ||||| || ||||| Sbjct 1113 ATAATTGGGAAAAGTTCAACGGTGAGCAGACCAATCCCGGGGATTC 1068 >seq31691 Length=1813 Score = 80.6 bits (88), Expect = 8e-12 Identities = 121/172 (70%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 147 TTCCCGGCGATACTTTTAATTTGCAGATGACTGCGTTTGCGCGTATGGCGACTCCGTTGT 206 |||| || ||||| || |||||| | ||||| | ||| | ||| | || || || | Sbjct 1813 TTCCTGGTGATACGTTCAATTTGAATATGACAGGGTTCGGCCGTCTTGCTACGCCTATTC 1754 Query 207 TTCCGTTGATGGATAATTTGTACATGGATTCGttttttttCTTTGTTCCGAATCGTTTGG 266 ||| | |||||||| |||| | || ||||||| || ||||| || || ||||||| Sbjct 1753 ATCCTGTTATGGATAACATGTATTTAGAGACGTTTTTCTTTTTTGTGCCAAACCGTTTGG 1694 Query 267 TTTGGATTCATTGGAAGCAGTTCATGGGTGAGCAGGATAATCCTGGTGATTC 318 ||||| | ||| | |||| | ||||| || | ||||||||||||| Sbjct 1693 TTTGGGACAACTGGGAAAAGTTTAATGGTGAACAAACTGATCCTGGTGATTC 1642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14281597251460