Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_030476.1 Length=5184 Score E Sequences producing significant alignments: (Bits) Value seq37323 91.5 5e-15 seq61318 89.7 2e-14 >seq37323 Length=4379 Score = 91.5 bits (100), Expect = 5e-15 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 2731 TGCTACTGCTACTACTATTAATCAGCTTCGTATGGCATTCCAGATTCAGAAGTTGTATGA 2790 ||||||||| ||||||||||| ||| | | || || | ||| | || | ||| Sbjct 2603 TGCTACTGCCGCTACTATTAATGCTCTTAGACTTGCCTTTAGTACTCAAAGATTTTTTGA 2544 Query 2791 AAAAGATGCCAGAGGTGGAACGAGATATATTGAATCAATAAAGTCTCACTTTGGAGTTAC 2850 ||||||||| | ||||| || ||||||||||||| ||| ||||| || ||| || Sbjct 2543 AAAAGATGCTCGTGGTGGTACTAGATATATTGAATTAATTAAGTCACATTTTAACATTGA 2484 Query 2851 TTCTCCTGATGCAAGGCTGCAGAGACCTGAGTACCTCGGTGGT 2893 |||||| ||| ||| || || |||||||| || | |||||| Sbjct 2483 TTCTCCCGATCAAAGACTTCAAAGACCTGAATATTTAGGTGGT 2441 >seq61318 Length=2697 Score = 89.7 bits (98), Expect = 2e-14 Identities = 312/476 (66%), Gaps = 21/476 (4%) Strand=Plus/Minus Query 2731 TGCTACTGCTACTACTATTAATCAGCTTCGTATGGCATTCCAGATTCAGAAGTTGTATGA 2790 ||| |||||| | || | ||| | | ||| || ||||||||||| || ||| ||| Sbjct 2471 TGCCACTGCTGCAACCGTCAATGATTTGCGTGAAGCCTTCCAGATTCAAAAATTGCTTGA 2412 Query 2791 AAAAGATGCCAGAGGTGGAACGAGATATATTGA-ATCAATAAAGTCTCACTTTGGAGTTA 2849 || ||||| | || || ||| | |||| ||| || | ||| |||| || ||||| | Sbjct 2411 AAGGGATGCGCGTGGAGGCACGCGTTATACTGAGATTGTTCAAG-CTCATTTCGGAGTAA 2353 Query 2850 CTTCTCCTGATGCAAGGCTGCAGAGACCTGAGTACCTCGGTGGTAATAGAGTTCCTATCA 2909 ||||| ||| ||||| || |||||||| || || ||||| || | | |||||| Sbjct 2352 CTTCTGATGACGCAAGACTCCAGAGACCGGAATATCTCGGAGGAGGGAAAACTCCTATTT 2293 Query 2910 ACATTAATCAGGTTATTCAGACTTCTAACTCTGGTACAGATATAACACCTCAGGGTAATG 2969 ||||||| | || || ||| | ||| | | || ||| ||||| |||||| Sbjct 2292 ACATTAACCCTGTCCCGCAAACTAGCAGTACTGAT---GCTACAACTCCTCAAGGTAAT- 2237 Query 2970 TTGCAGGTTATTCGT--TG--TCTAACGACAGTAATAATGATTTTTTCCGTTCATTTACT 3025 ||| | |||| || || ||| ||| | ||| |||| || || || Sbjct 2236 TTGGCTGCTATTGGTACTGGTTCT---TTTAGTGGTCATGGTTTTACTAAATCTTTCACC 2180 Query 3026 GAACACGGCTTTATCATCGG---TG-TTATGGTAGCAAGATATGATCATACATATCAGCA 3081 || ||| | | ||||| || || || || ||| | | || | || ||||| || Sbjct 2179 GAGCACTGTATCATCATTGGCCTTGTTTCTGTTAG---GGCA-GACCTGACCTATCAACA 2124 Query 3082 AGGTTTAGAGCGTTTCTGGAGCAGAAAAACACGATTTGACTACTATTATCCAGTGCTTGC 3141 ||| || | | | ||||||||| || ||| | ||| | || | |||| |||||| Sbjct 2123 AGGGTTGAATAGAATGTGGAGCAGACAAGGACGTTATGATTTTTACTGGCCAGCGCTTGC 2064 Query 3142 TAATATTGGCGAACAAGCAATATTGAATAAAGAGATTTACGCTCAGGGTACTGGTG 3197 || |||| || || || || | ||||| || ||||||||||| |||| | ||| Sbjct 2063 CCATCTTGGTGAGCAGGCCGTACTTAATAAGGAAATTTACGCTCAAGGTAATAGTG 2008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16465728671690