Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_001899.1 Length=5941 Score E Sequences producing significant alignments: (Bits) Value seq107257 140 1e-29 >seq107257 Length=3261 Score = 140 bits (154), Expect = 1e-29 Identities = 188/259 (73%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 2428 AAATATCAATGTAATGATGATGAAGATTTAATTGTAGAATTCTTAACTAACCTTGTTAAT 2487 ||||| || | ||||||||| || ||| |||| | |||| ||| | || || ||| Sbjct 544 AAATACCAGTTTAATGATGACGATGATATAATCAAACAATTTTTACAGGAACTAGTAAAT 603 Query 2488 GTACTAGATAGACGTATACCTAAGTTAAATGCTTTTCTAATTATATCTCCTCCAAGTGGT 2547 ||| | || | | | || || || |||| ||| | ||| ||| || ||| | Sbjct 604 GTATTGGACAAAAGAATTCCAAAAAGAAATTGCTTTGTGGTTAAATCGCCACCATCGAGC 663 Query 2548 GGTAAAAATTTCTTTTTTGATATGATTTTTGG-ATTGTTATTATCATATGGTCAATTGGG 2606 ||||||||||||||||||||||||||| | || || || || | |||| ||| | || Sbjct 664 GGTAAAAATTTCTTTTTTGATATGATTCTAGGAATAGTGTGTAAC-TATGAACAACTTGG 722 Query 2607 ACAAGCTAATAGACATAACTTATTTGCTTTTCAAGAAGCTCCAAATAAACGTGTACTATT 2666 || || |||| | ||||| |||| || ||||||||||| ||||||||| | || || | Sbjct 723 GCAGGCGAATAAAAATAACGTATTCGCATTTCAAGAAGCACCAAATAAAAGATTATTACT 782 Query 2667 ATGGAATGAACCTAATTAT 2685 |||||||||||| |||||| Sbjct 783 ATGGAATGAACCCAATTAT 801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18868979824840