Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_001899.1
Length=5941
Score E
Sequences producing significant alignments: (Bits) Value
seq107257 140 1e-29
>seq107257
Length=3261
Score = 140 bits (154), Expect = 1e-29
Identities = 188/259 (73%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 2428 AAATATCAATGTAATGATGATGAAGATTTAATTGTAGAATTCTTAACTAACCTTGTTAAT 2487
||||| || | ||||||||| || ||| |||| | |||| ||| | || || |||
Sbjct 544 AAATACCAGTTTAATGATGACGATGATATAATCAAACAATTTTTACAGGAACTAGTAAAT 603
Query 2488 GTACTAGATAGACGTATACCTAAGTTAAATGCTTTTCTAATTATATCTCCTCCAAGTGGT 2547
||| | || | | | || || || |||| ||| | ||| ||| || ||| |
Sbjct 604 GTATTGGACAAAAGAATTCCAAAAAGAAATTGCTTTGTGGTTAAATCGCCACCATCGAGC 663
Query 2548 GGTAAAAATTTCTTTTTTGATATGATTTTTGG-ATTGTTATTATCATATGGTCAATTGGG 2606
||||||||||||||||||||||||||| | || || || || | |||| ||| | ||
Sbjct 664 GGTAAAAATTTCTTTTTTGATATGATTCTAGGAATAGTGTGTAAC-TATGAACAACTTGG 722
Query 2607 ACAAGCTAATAGACATAACTTATTTGCTTTTCAAGAAGCTCCAAATAAACGTGTACTATT 2666
|| || |||| | ||||| |||| || ||||||||||| ||||||||| | || || |
Sbjct 723 GCAGGCGAATAAAAATAACGTATTCGCATTTCAAGAAGCACCAAATAAAAGATTATTACT 782
Query 2667 ATGGAATGAACCTAATTAT 2685
|||||||||||| ||||||
Sbjct 783 ATGGAATGAACCCAATTAT 801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18868979824840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |