Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_004284.1 Length=5908 Score E Sequences producing significant alignments: (Bits) Value seq107257 118 4e-23 >seq107257 Length=3261 Score = 118 bits (130), Expect = 4e-23 Identities = 191/267 (72%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 3286 ATAGTTAGGTTCATTCCATAATAATACACGTTTATTAGGTGCTTCTTGAAATGCAAACAA 3345 ||| || ||||||||||||| ||||| | |||||| ||||||||||||||||| || | Sbjct 801 ATAATTGGGTTCATTCCATAGTAATAATCTTTTATTTGGTGCTTCTTGAAATGCGAATAC 742 Query 3346 GTTATGTCTATTAGCTTGACCTAACTGACCATAAGATA-GTAATAATCCAAAGATCATAT 3404 ||||| | |||| || || || | || ||| || || | || ||| | ||||||| Sbjct 741 GTTATTTTTATTCGCCTGCCCAAGTTGTTCAT-AGTTACACACTATTCCTAGAATCATAT 683 Query 3405 CAAAAAAGAAATTTTTACCAGCAC-TTGGAGGAGATATAATAAGAAAAGCATTTAACTTA 3463 ||||||||||||||||||| || | ||| || ||| ||| | ||| |||| || Sbjct 682 CAAAAAAGAAATTTTTACC-GCTCGATGGTGGCGATTTAACCACAAAGCAATTTCTTTTT 624 Query 3464 GGTATACGACGGTCTAATACATTGACCAAAT-TAGTAAGAAACTCTACAATTAAATCTTC 3522 || || | ||| |||||||| || | | |||| ||| | | |||| ||| || Sbjct 623 GGAATTCTTTTGTCCAATACATTTACTAGTTCCTGTAA-AAATTGTTTGATTATATCATC 565 Query 3523 ATCATCATTACATTGAAATTTAAGTAA 3549 ||||||||| | || |||| || || Sbjct 564 GTCATCATTAAACTGGTATTTCAGCAA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18763548681220