Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_004286.1
Length=6039
Score E
Sequences producing significant alignments: (Bits) Value
seq107257 134 5e-28
>seq107257
Length=3261
Score = 134 bits (148), Expect = 5e-28
Identities = 197/268 (74%), Gaps = 8/268 (3%)
Strand=Plus/Plus
Query 2466 TTGCTTAAATATCAATGTAATGATGATGAAGGTTTAATAGTAGAATTTCT-CACTAATTT 2524
||||| ||||| || | ||||||||| || | | |||| | ||||| | || || |
Sbjct 538 TTGCTGAAATACCAGTTTAATGATGACGATGATATAATCAAACAATTTTTACAGGAACTA 597
Query 2525 GGTCAATGTATTAGACCGTCGTATACCTAAGTTAAAT-GCTTTCCTTGTAATGTCTCCTC 2583
| | |||||||| ||| | || || || |||| ||||| | || | || || |
Sbjct 598 G-TAAATGTATTGGACAAAAGAATTCCAAAAAGAAATTGCTTTG-TGGTTAAATCGCCAC 655
Query 2584 CGA-GTGCTGGTAAAAATTTCTTTTTTGATATGATTTTTGGATTATTAT-TATCTTATGG 2641
| | || ||||||||||||||||||||||||||| | ||| || | | || | ||||
Sbjct 656 CATCGAGC-GGTAAAAATTTCTTTTTTGATATGATTCTAGGAATAGTGTGTAAC-TATGA 713
Query 2642 ACAACTTGGACAAGCTAATAGACATAACTTATTTGCTTTTCAAGAAGCTCCGAATAAACG 2701
||||||||| || || |||| | ||||| |||| || ||||||||||| || |||||| |
Sbjct 714 ACAACTTGGGCAGGCGAATAAAAATAACGTATTCGCATTTCAAGAAGCACCAAATAAAAG 773
Query 2702 TGTACTTCTATGGAATGAACCAAACTAT 2729
|| | |||||||||||||| || |||
Sbjct 774 ATTATTACTATGGAATGAACCCAATTAT 801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19178005874832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |