Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29] 146,196 sequences; 315,428,702 total letters Query= NC_012685.1 Length=5759 Score E Sequences producing significant alignments: (Bits) Value seq107257 149 2e-32 >seq107257 Length=3261 Score = 149 bits (164), Expect = 2e-32 Identities = 192/260 (74%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 2232 AAATTTCAATTTGAGGATAACGACGAAAAAATCACTCAATTTTTAGTAGATTTAATTGAT 2291 |||| || ||| | ||| |||| || | ||||| ||||||||| || || | || Sbjct 544 AAATACCAGTTTAATGATGACGATGATATAATCAAACAATTTTTACAGGAACTAGTAAAT 603 Query 2292 GTACTTGATAAACGAGTTCCAAAACAAAATGCTTTTGCAGTAATTTCGCCACC-TAGTTC 2350 ||| | || ||| || |||||||| |||| |||| || | |||||||| | | | Sbjct 604 GTATTGGACAAAAGAATTCCAAAAAGAAATTGCTTTGTGGTTAAATCGCCACCATCGAGC 663 Query 2351 AGGCAAAAATTTTTTCTTTGACATGATTATGGCAATT-TGTTTAAACTATGGACAATTAG 2409 || |||||||| || ||||| |||||| | | ||| ||| ||| ||||| |||| | | Sbjct 664 -GGTAAAAATTTCTTTTTTGATATGATTCTAGGAATAGTGTGTAA-CTATGAACAACTTG 721 Query 2410 GACAAGCAAACAGACATAATTTGTTTGCATTTCAAGAAGCTCCCAATAAAAGATTATTAC 2469 | || || || | | |||| | || |||||||||||||| || |||||||||||||||| Sbjct 722 GGCAGGCGAATAAAAATAACGTATTCGCATTTCAAGAAGCACCAAATAAAAGATTATTAC 781 Query 2470 TTTGGAATGAACCAAACTAT 2489 | ||||||||||| || ||| Sbjct 782 TATGGAATGAACCCAATTAT 801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18287511093360