Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eristalis_20dimidiata_20[genbank_20GCA_5F001015145.1_202015-05-29]
146,196 sequences; 315,428,702 total letters
Query= NC_012685.1
Length=5759
Score E
Sequences producing significant alignments: (Bits) Value
seq107257 149 2e-32
>seq107257
Length=3261
Score = 149 bits (164), Expect = 2e-32
Identities = 192/260 (74%), Gaps = 4/260 (2%)
Strand=Plus/Plus
Query 2232 AAATTTCAATTTGAGGATAACGACGAAAAAATCACTCAATTTTTAGTAGATTTAATTGAT 2291
|||| || ||| | ||| |||| || | ||||| ||||||||| || || | ||
Sbjct 544 AAATACCAGTTTAATGATGACGATGATATAATCAAACAATTTTTACAGGAACTAGTAAAT 603
Query 2292 GTACTTGATAAACGAGTTCCAAAACAAAATGCTTTTGCAGTAATTTCGCCACC-TAGTTC 2350
||| | || ||| || |||||||| |||| |||| || | |||||||| | | |
Sbjct 604 GTATTGGACAAAAGAATTCCAAAAAGAAATTGCTTTGTGGTTAAATCGCCACCATCGAGC 663
Query 2351 AGGCAAAAATTTTTTCTTTGACATGATTATGGCAATT-TGTTTAAACTATGGACAATTAG 2409
|| |||||||| || ||||| |||||| | | ||| ||| ||| ||||| |||| | |
Sbjct 664 -GGTAAAAATTTCTTTTTTGATATGATTCTAGGAATAGTGTGTAA-CTATGAACAACTTG 721
Query 2410 GACAAGCAAACAGACATAATTTGTTTGCATTTCAAGAAGCTCCCAATAAAAGATTATTAC 2469
| || || || | | |||| | || |||||||||||||| || ||||||||||||||||
Sbjct 722 GGCAGGCGAATAAAAATAACGTATTCGCATTTCAAGAAGCACCAAATAAAAGATTATTAC 781
Query 2470 TTTGGAATGAACCAAACTAT 2489
| ||||||||||| || |||
Sbjct 782 TATGGAATGAACCCAATTAT 801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18287511093360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |