Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_007817.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq5881 1710 0.0
>seq5881
Length=5481
Score = 1710 bits (1896), Expect = 0.0
Identities = 2346/3246 (72%), Gaps = 104/3246 (3%)
Strand=Plus/Minus
Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712
|| |||||||||||||| || || | | | || |||| ||||| |||||||| ||||||
Sbjct 4931 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 4872
Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772
|||||| | | || | | |||||||| ||||| || || |||| || ||||
Sbjct 4871 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 4812
Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832
| || || || ||||| || | || || ||||| | ||| || ||||||||||||
Sbjct 4811 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 4752
Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892
|||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 4751 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 4692
Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952
| |||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 4691 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC- 4633
Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010
||| | |||||| | ||||| || || |||||| ||||||| ||||||||| |||
Sbjct 4632 -AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 4574
Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070
| |||||||| ||||| | ||| || | | || || |||||||||||||||
Sbjct 4573 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 4514
Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130
|||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| ||||
Sbjct 4513 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 4454
Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190
| || |||| ||| | ||||| |||||| | || || || || |||||||||||| |
Sbjct 4453 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 4394
Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250
|||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | |
Sbjct 4393 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 4334
Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310
| ||||||||||||| ||||||||||||||| ||||| |||||||| | || |
Sbjct 4333 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 4274
Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370
| |||||||| | || | ||||| ||| ||||||||||| ||||| ||| |||||
Sbjct 4273 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 4214
Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCC 1430
||| | || || |||| |||||||||| ||| | |||| ||||||| ||| |
Sbjct 4213 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGC 4154
Query 1431 CGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGA 1490
|||||||| | || |||||||||||||| || | |||| | |||||||||||| |||
Sbjct 4153 CGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAG 4094
Query 1491 AATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGC 1550
|||| ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||
Sbjct 4093 TTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGC 4034
Query 1551 GCAATTTGACCCGTCAA----ATCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATG 1606
|| || || | || || || || |||||||||||||||||||||||||| |||
Sbjct 4033 GCGCTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATG 3978
Query 1607 ACAACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCA 1666
|| ||| |||||| | ||||||||||||||| | ||||| || |||||| |||
Sbjct 3977 ACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCA 3918
Query 1667 GGAATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGA 1726
||||||||| || || ||||||||||||||||||||||||||||| ||||||||| |
Sbjct 3917 GGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAA 3858
Query 1727 AATTCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACC 1786
||||| | || ||| | ||||||||||||||||| || |||||||||||||| |
Sbjct 3857 AATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAAC 3798
Query 1787 TGAACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCTAGGT 1845
| |||| | ||| |||| |||||||| | || ||||| || | || |||||||| ||
Sbjct 3797 T-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGC 3739
Query 1846 GCTCTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATCAATG 1905
| || ||||||||||||| | || || |||||| || ||||||| | | || |
Sbjct 3738 ACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTT 3679
Query 1906 CTTGACTTATTAAATGAACGTGGACTATTATC-----CACA---TCAACAACCAACCCAA 1957
||||| | ||||| || |||||| || |||| | | | |||||| | ||
Sbjct 3678 GTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCA--CTAA 3621
Query 1958 AAGGAAATACAAAATGA---ACTCTAACGAATCTGCTGTTGCCTTCGCTACTGCTCTCGC 2014
||| || | | |||| | || ||| | || ||| || ||| | ||
Sbjct 3620 TAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGC 3561
Query 2015 ATCTATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGACGACTTCGATTT 2074
||||| ||||||||||||||||| | || |||| | |||||||| || ||||||||
Sbjct 3560 CTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTT 3501
Query 2075 CTTAACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGCCGCGCTATTGA 2134
| || || || || |||||||| ||||||||||| |||||||| ||| ||||
Sbjct 3500 TCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGA 3441
Query 2135 GGCCTGCGTATATGGTACATTGGACTTTGTCGGATACCCTCGCTTTCCTGCTCCTGTTGA 2194
||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 3440 GGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGA 3381
Query 2195 GTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCT 2254
||||||||||||||||||||||||||||||||||||||| ||||| || || || |||||
Sbjct 3380 GTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCT 3321
Query 2255 TATTATGGAAGGCGCCGAGTTCACCGAAAATATTATCAATGGTATTGACCAGCCAGTTAA 2314
|| ||||||||||| || || || ||||| ||||| ||||| | || | || |||||
Sbjct 3320 CATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAA 3261
Query 2315 GGCCGCTGAACTATTCGCTTTTACCCTGCGTGTACGCGCCGGAAACACTGACCATGTTAC 2374
||||||||| | ||||| |||||| ||||||||||||| |||||||||||| | ||||
Sbjct 3260 AGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTAC 3201
Query 2375 ACATGCAGAAACTAACGTACGTGAACAATTACGTGCTCAAGGAGTAATGTAATGGCTAAA 2434
| |||||| ||||| ||| || |||||||||| ||||||| |||||||| |||||
Sbjct 3200 TGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAA 3141
Query 2435 ---------------GGCTCTCG---TCGGCGTTC---GCCGTCCCG-----CT------ 2462
||| |||| | | ||| | ||||| || ||
Sbjct 3140 GGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGC 3081
Query 2463 ----CTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGC 2518
|||||| ||||| || |||||||| || || |||||| ||| || ||||||
Sbjct 3080 AAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAA--TTGCAGGGGC 3023
Query 2519 TTCGGCCCCTCTATTTAAGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATT 2578
|||||||||| || || |||||| | |||||||| |||||||| ||| || || ||
Sbjct 3022 TTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATG 2964
Query 2579 CCTAACGACCTTTCTCACCTCGTCTTCGAGGCTGGTAAAATCGGCCGTTTAAAAACTATC 2638
|| | |||||||| || || | |||| |||||| | || || ||| | | || ||
Sbjct 2963 CCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATT 2904
Query 2639 TCCTGGACTCCAGTTGTCGCTGGCGACTCATTTGAAACTGAGATGGTAGGCGCTATTCGC 2698
|| ||||| ||| ||||||||||||| || || | || || |||||| | ||
Sbjct 2903 TCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGT 2844
Query 2699 CTTTCTCCACTCCGTCGCGGCCTTGCCGTCGACTCTCGCGTGGATATCTTCTCTTTCTAT 2758
||||||||| | ||||| |||||||| | |||||| || || || || |||| |||
Sbjct 2843 CTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTAT 2784
Query 2759 ATTCCGCATCGTCATATCTATGGTCAAGAATTCATTGAATTCATGAAAGCTGGCGTTAAT 2818
| || |||||||| | |||||| || | | ||| | |||||||| | ||| ||||||
Sbjct 2783 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAAT 2724
Query 2819 GCCACTCCTCTCGCACCTGTT---ACTACTGCCTCTGGCTGGGATGCTTCTGCCTATCTT 2875
|||||||||||| | ||||| ||||||| | | || | | || | ||||
Sbjct 2723 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTAT---ATTGACCATGCCGCTTTTCTT 2667
Query 2876 GGCACTATTCCATCCTCAAACC-TCAAGGTTCCTAAATTCTTACATCAAGGATACCTTAA 2934
||||| ||| | ||| | ||| || | ||||| || ||| || || | ||
Sbjct 2666 GGCACGATT-AACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAA 2608
Query 2935 TATTTACAACAACTACTTTAAGCCACCGTGGGATG-CTGACCTTACATACGCTAACCCAT 2993
||| || |||||||| ||||| | |||| ||||| |||||| ||| | |||||||
Sbjct 2607 TATCTATAACAACTATTTTAAAGCGCCGT-GGATGCCTGACCGTACCGAGGCTAACC--- 2552
Query 2994 CTAACATGCCTGAACAGGATTA---TAAATGGGGCGTTCG-TGTCGCTAACTTAAAATCT 3049
|||| || | | || ||| | | | || | || || || | || |||| |
Sbjct 2551 CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAAC- 2493
Query 3050 ATCTGGACCGCCCCCTTACCTCCTAACTCTAAAACATCAGAGACTATGACCACTGGCGCT 3109
|| ||||| || || | |||||| | || | || ||||| ||| |
Sbjct 2492 ATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC 2433
Query 3110 ACGTCTATTGATATTATGGGCCTGCAAGCTGCTTATGCTAAATTGCACACCCAACAAGAA 3169
|| |||||||| |||||||| |||||||||||||||||||| ||||| || | ||||||
Sbjct 2432 ACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAA 2373
Query 3170 CGTGACTACTTCATGACTCGCTATCGCGATATTATGAAAGACTTCGGAGGTCACACCTCC 3229
||||| ||||||||| || || | ||| |||| || |||||| | |||||
Sbjct 2372 CGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCT 2313
Query 3230 TATGACGGTGATAACCGTCCTCTGCTGCTTATGCGCTCTGAATTTTGGGCCTCTGGCTAT 3289
||||||| ||| ||||||||| | || | ||||||||| | | ||||| |||||||||
Sbjct 2312 TATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTAT 2253
Query 3290 GACGTCGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCCGGTCGCGTCCAACAAACA 3349
|| || || || ||||||||| | || ||||| ||||| || ||||| || ||||| ||
Sbjct 2252 GATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACC 2193
Query 3350 TTCAATCACAAAGTACCTCGCTTCTATGTACCTGAACACGGCGTCATTATGACTCTCGCC 3409
| || || || || || |||| ||| ||||| || ||| || | ||||| ||
Sbjct 2192 TATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCG 2133
Query 3410 GTTACTCGCTTCCCTCCTACT--CATGAAATGGAGATGCACTATCTTGTCGGTAAAGAAT 3467
|| ||| || || |||||| | ||| ||||| || || ||| || |||||
Sbjct 2132 CTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTG 2075
Query 3468 CTTTAACCTATACCGACCTCGCCTGCGACCCTGCTCT-TATGGCTAACCTGCCTCCGCGC 3526
|||| || |||||||| | || ||||||||| | | |||||| ||| |||| |||||
Sbjct 2074 CTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGT 2016
Query 3527 GAAGTATCCCTTAAGGAATTCTTCCACTCCTCGCCGGACTCCGCT---AAGTTCAAAATT 3583
||| | || | ||||| | |||| | || | || || || ||||| || |||
Sbjct 2015 GAAATTTCTATGAAGGATGTTTTCC-GTTCTGG--TGATTCGTCTAAGAAGTTTAAGATT 1959
Query 3584 GCCGAGGGCCAATGGTATCG-CACGCAGCCT--GACCGCGTCGCATTCCCTTATAACGCA 3640
|| ||||| || |||||||| | || |||| | | || | | ||||| ||
Sbjct 1958 GCTGAGGGTCAGTGGTATCGTTATGC-GCCTTCGTATGTTTCTCCT--GCTTATCACCTT 1902
Query 3641 CTTGACGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTACTGACTTAAAACAACGTGTCCT 3699
||||| ||||| || ||| | || | | ||| ||| ||| || || |||| || ||
Sbjct 1901 CTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACT 1843
Query 3700 AGTTAACACTGATAACTACGACGAAATCTTTCAGTCTATGCAACTCGCACACTGGAATAT 3759
|| | || | || ||| | || ||||| | || | || |||||||
Sbjct 1842 TATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAG 1783
Query 3760 GCAAACTAAATTTAATACTACCGTCTATAGACATATGCCTACGACTCGTGATTCAATCAT 3819
|| |||||||||| ||||| ||| | || |||| || ||||| |||||||||||
Sbjct 1782 TCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCAT 1723
Query 3820 GACGTC 3825
||| ||
Sbjct 1722 GACTTC 1717
Score = 203 bits (224), Expect = 1e-48
Identities = 538/808 (67%), Gaps = 44/808 (5%)
Strand=Plus/Minus
Query 4138 TAATCAGGTCTTCTCCGTCTGTGCTCACATCACATCTGACGTGGACCCTAAATATATTGC 4197
||||||||| | || || ||||| | || | | ||| | |||||||||| | ||||
Sbjct 1396 TAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC 1337
Query 4198 GTGCCTCGTTCGCTTTGAGGTCACTGCTGGTACCACTCCTACCGCTATGCCTCCTGTCTA 4257
|| | |||||||||||| || | | | | ||| | || | || ||| |||
Sbjct 1336 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTAC--CCTC----CCGACTGCCTA 1283
Query 4258 TGATGCTTACCCTATCGCTGGTTACTATGACGCTGGCTCTTATACTGTTGAAGACTGCGC 4317
||||| ||| ||| | | |||| | |||| | ||| | |||||| || | ||||| |
Sbjct 1282 TGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGT 1223
Query 4318 TACTATT--CCTACTCACGCTGTCTCTTCTGGCAACGATGTATATGTCGGCCTTATGCTT 4375
|||||| | | || | | | | | ||||| |||| ||||| || | ||| ||
Sbjct 1222 GACTATTGACGTCCTTCCCCGTACGC--CGGGCAATAATGTTTATGTTGGTTTCATGGTT 1165
Query 4376 TTCTCTCGCATGTGGCCCGTTGCAAAACTATCCGGTATCGCTTCCCTTAATCAGGTAAAC 4435
| ||| | | ||| | | ||| ||| | | ||| || |||||||| |
Sbjct 1164 TGGTCTAACTTTA---CCGCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGTTATT 1108
Query 4436 AAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTCTCTATGTTTGGTGCAATCG 4494
|| || | | |||||| || ||||| | |||| ||| |||||||||||| || |
Sbjct 1107 AAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT---TATGTTTGGTGCTATTG 1051
Query 4495 CTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAACAAAGCCTTTGGGGGCGGTC 4554
|||||||||| || || |||||||||| || ||| ||| ||||| |||||||
Sbjct 1050 CTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTC 991
Query 4555 AATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCTTC---TGACAATAACGTA- 4610
|| ||| |||| |||| ||||||||||||| || ||| | | |||||| |||
Sbjct 990 AAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAG 931
Query 4611 --ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAAGGCTCTAATCCACCCAATG 4668
|| || |||||||||||| ||||| || ||||||||||||||| || ||
Sbjct 930 GCATGGG------TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACC 877
Query 4669 GCCAACAAGCTGCTCCCAATGCTATTTCGGGCGTTCTCGCTGACACTGGCAAA-GACGCC 4727
| | || | || | | | |||| || | | | ||| | |||| ||| ||| |
Sbjct 876 CTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTC 817
Query 4728 CT--ATCTTCAAT-CA--CTGGC---GCTGGCGT---TAATAAACTTATGGAAAAAATCG 4776
| | | | | || ||||| ||| ||| | |||| | | || | |
Sbjct 816 TTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTG 757
Query 4777 GACTATCT---AAAACTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTG 4833
|||| | || |||| ||||||||||| ||||| || |||||||||||| |||
Sbjct 756 GACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTG 697
Query 4834 CATTCCCCGACCTCAACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGG 4893
|||| || || || || | ||||| |||||||| |||| |||||| |||||||| ||||
Sbjct 696 CATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG 637
Query 4894 TTGACGCTGGCTTCCAAAACCAAAAAGA 4921
||||||| || || | || ||||||||
Sbjct 636 TTGACGCCGGATTTGAGAATCAAAAAGA 609
Score = 167 bits (184), Expect = 8e-38
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072
|| || || ||||| || || || ||||| ||||| |||||||| | ||| | ||
Sbjct 517 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 458
Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132
|| || |||| | ||||||| |||||| | |||||||| | || |||| |||||
Sbjct 457 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 398
Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192
|| ||| || |||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct 397 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 338
Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242
|| |||||||||||||||||| | || || || ||| ||||||| ||||
Sbjct 337 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17441883774285
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