Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq5881 1835 0.0 >seq5881 Length=5481 Score = 1835 bits (2034), Expect = 0.0 Identities = 2580/3591 (72%), Gaps = 137/3591 (4%) Strand=Plus/Minus Query 468 TAATCGAAGAGTTAGACGAATGCTACAACGTGCTCGGACAACTTGATATTAATAACACTA 527 |||| || || || | |||||||||| |||||| |||||||||||||||||||||| Sbjct 5122 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 5063 Query 528 TAGACCACAAACCTATCGGTAACGCCAAATGGGACTTAATGTATGAAAAACCTGTCTATA 587 |||||||| || || ||| |||||| ||| | | || || | || Sbjct 5062 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT---- 5007 Query 588 AACACTGGTATG-----AACTGGTATCAAAACGACCCCTTAAATCAATCAGAGAGGACTA 642 || | | | || | |||| | |||| || ||||| || | || || || Sbjct 5006 -ACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTA 4948 Query 643 CAACTATGCAAAGGCTAAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCAC 702 || || | || || |||| ||| |||||||| || | | | || |||| ||||| Sbjct 4947 TAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCAC 4888 Query 703 CATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCA 762 |||||||| || | |||||| | ||||| | ||||||||||| ||||| || || Sbjct 4887 TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCA 4828 Query 763 CACTGATGGCTGGTATGTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGG 821 ||||||| |||| | | || || || |||||||| || ||||| || || |||| ||| Sbjct 4827 TGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGG 4769 Query 822 ACTTCTATGCTAACCCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTC 881 || |||| ||| ||||||||| | ||||||||||| ||||||||||| |||||||||| Sbjct 4768 CGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTC 4709 Query 882 TCACTGCCGAGGGTCGTTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTG 941 | ||||||||||||| || |||||||| | |||||||||||||| ||||||| Sbjct 4708 TTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTG 4649 Query 942 TGCCTGAGTATGGCACCCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCG 999 ||||||||||||| || ||| |||||||| | || || || || ||||| ||||||| Sbjct 4648 TGCCTGAGTATGGTAC--AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCG 4591 Query 1000 CACACTTCCTTTGGGTTCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCA 1059 ||||||||| ||| | |||||||| |||||| | ||| || | | || || Sbjct 4590 GACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA 4531 Query 1060 AATAAATAGCTTGCAAAACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTA 1119 |||||||||||||||| || ||||||||||||||| ||||||||||||||| || || Sbjct 4530 GTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTA 4471 Query 1120 TTCTCAGGATGCTTTCTCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACC 1179 | ||||| ||||| || || |||| ||| | |||||||| ||| | || ||||| || Sbjct 4470 CACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC 4411 Query 1180 CCTTAAATCCACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAA 1239 |||||| | ||| ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct 4410 GCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAA 4351 Query 1240 ATCTGATGTTGACATAGCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAA 1299 || ||| | ||| | || || ||||| |||| | || |||||||| || |||| Sbjct 4350 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAA 4291 Query 1300 AACGCAGATGGCTCTTTTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGG 1359 ||| || || | || | || ||||| || || |||| ||||||||||||||||||| Sbjct 4290 AACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGG 4231 Query 1360 GATGAAACTACTCCCAATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGT 1419 ||||||| | ||| ||||||| | ||| || ||||||| ||||||||||| ||| | | Sbjct 4230 GATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCT 4171 Query 1420 GGGTTACGACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACG 1479 ||||||||||| ||| ||||||||| | || |||||||||||||| || | |||| | | Sbjct 4170 GGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAG 4111 Query 1480 ATTGAGGCTGGCAAAGCAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAA 1539 ||||||||||| ||| |||||||||||||||||| |||||||||||||||||| || Sbjct 4110 ATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAA 4051 Query 1540 TCTGCTAAAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTT 1599 |||||| ||||| |||||| || || || || || | |||| ||| |||||||| Sbjct 4050 TCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTT 3991 Query 1600 TATCGCTTCAATGACGCAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTA 1659 ||||||||| ||||||||||| ||| || | |||||||||||||||| | ||||| || Sbjct 3990 TATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTA 3931 Query 1660 CGTTACTAATGCAGGAATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGG 1719 || ||| ||||||||| || |||| |||||| |||||||||||||||||||||| Sbjct 3930 TCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGG 3871 Query 1720 TGGAAAATGAAGAACTTCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACC 1779 ||||||||| || ||| | || ||| | |||||| |||||||| || ||| Sbjct 3870 CGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACC 3811 Query 1780 TTTCGCCATCATCTCAACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCT 1838 ||||||||||| || |||| | | |||| ||||||||| | ||||| || || ||||| Sbjct 3810 TTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCT 3752 Query 1839 CAATATGATGGGCGCTCTTCTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGG 1898 |||||| | ||| | | | ||||||||||| | ||||| |||||| || ||||| Sbjct 3751 TAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGG 3692 Query 1899 CAAAGAATCAATGCTTGACATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG- 1957 | ||| || | |||||||| |||| || ||||| || ||| | | | ||| Sbjct 3691 TAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGC 3635 Query 1958 -GCTTAAC--TTACAAAGGAATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTT 2011 | | ||| || | | || || |||| ||| | ||| | | ||| || Sbjct 3634 TGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTC 3575 Query 2012 CAAACCGCTATTGCCTCCATCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAG 2071 || |||||| | ||||| || || || |||||||| ||| | ||| | || | || || Sbjct 3574 CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAA 3515 Query 2072 GACGATTTCGAATTCTTAACTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCT 2131 || |||||||| || | || || || || |||||||| ||||||||||| |||||| Sbjct 3514 GATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCT 3455 Query 2132 CGCCGCGCTATTGAGGCTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTT 2191 || ||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 3454 CGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTT 3395 Query 2192 CCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATT 2251 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3394 CCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATT 3335 Query 2252 CAAACGGCATGTCTTATTATGGAAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTC 2311 |||||||| ||||| || ||||||||||||||||| || |||||||| |||||||| ||| Sbjct 3334 CAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTC 3275 Query 2312 GATGCCCCGGTTAAAGCCGCTGAACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAAC 2371 || |||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 3274 GAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAAC 3215 Query 2372 ACTGAGCTTATTACTTACGCAGAAAACAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTG 2431 ||||| || ||||| |||||||| | || | |||| ||||| | || || |||||||| Sbjct 3214 ACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTG 3155 Query 2432 ATG-GATGTC------TAAAAAATCTATTCGC---CGCTCTGGT---------------- 2465 ||| ||||| ||||||| | | || ||| ||||| Sbjct 3154 ATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGC 3095 Query 2466 -----------GGCAAATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCT 2514 ||||| |||||| ||||| || |||||||| || || |||||| | Sbjct 3094 GAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTT 3035 Query 2515 AATCTCTAAGGGGCTTCGGCCCCTCTATTTAAGGATACAAAATGTCTAACGTACAAACTT 2574 ||| | |||||||||||||||| || || |||||| | |||||||| | |||||| Sbjct 3034 AATTGC--AGGGGCTTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTG 2978 Query 2575 CCGCTGAACGTATTCCGCATGACCTCTCACATCTGGTATTCGAAGCTGGTAAAATCGGAC 2634 ||| || ||||| ||||||||||| || ||||| | ||| |||||| | || || | Sbjct 2977 GCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTC 2918 Query 2635 GCCTTAAAACTATCTCCTGGACTCCTGTTGTCGCTGGTGATTCTTACGAAACTGAAATGG 2694 | |||| || || || ||||| ||| ||||||| || || | ||| | || | Sbjct 2917 GTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCG 2858 Query 2695 TAGGCGCTATTCGTCTTTCTCCTCTCCGTCGTGGTCTGGCTGTCGACTCTCGCGTCGACG 2754 | |||||| | ||||||||||| | |||||||| || ||| | |||||| || ||| Sbjct 2857 TTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACA 2798 Query 2755 TCTTTACTTTCTATATCCCTCATCGTCATGTCTATGGTCAACAATGGATTGACTTTATGA 2814 | |||||||| ||| ||||||||||||| || |||||| |||| |||||| | || |||| Sbjct 2797 TTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGA 2738 Query 2815 AGACTGGCGTTAACGCTACTCCTCTGGC-TCCGGTAACTTGTTCCTCTGGCT---GGGAT 2870 || ||| ||||| || |||||||| | | | |||| | |||| | || Sbjct 2737 AGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAAC----ACTACTGGTTATATTGAC 2682 Query 2871 TCTGCTGCCTATCTTGGCAC---TATCCCGTCAACTAATTTGAAGGTTCCTAA--ATTCC 2925 ||| || | ||||||||| || ||| || ||| || | ||||| ||| Sbjct 2681 CATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAAT---AAAATCCCTAAGCATTTG 2625 Query 2926 TTCATCAATCTTATCTCAATATTTACAACAACTACTTTAAGCCGCCGTGGTCTAATGACC 2985 || ||| |||| | ||||| || |||||||| ||||| |||||||| ||||| Sbjct 2624 TT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACC 2567 Query 2986 TCACCTATGCTAACCCATCTAATATGCCCGCTGAGGAT--TACAAATGGGGCGTTC--GT 3041 ||| | ||||||| ||||| || | | ||| | | | | ||| | Sbjct 2566 GTACCGAGGCTAACC---CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTT 2510 Query 3042 GTCGCTAACTTAAAATCTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAAC-TAAGCA 3100 | || | || |||| | || ||||| || || ||||||||||| | | | | | | Sbjct 2509 GCTGCCATCTCAAAAAC-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGCTTTCTCG 2452 Query 3101 GGATATGACTACTGGCGCTACCA---CTATCGATATTATGGGCCTACAAGCTGCCTATGC 3157 | ||||| ||| |||||| |||| || |||||||| || |||||||| ||||| Sbjct 2451 CCAAATGACGACT---TCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGC 2395 Query 3158 TAAACTCCACACTGAACAGGAACGTGACTATTTCATGACTCGCTACCGCGATATTATGAA 3217 ||| | || ||||| || |||||||| || |||||| || |||| ||| |||| Sbjct 2394 TAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTC 2335 Query 3218 AGACTTTGGCGGTCACACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGATGCGCTC 3277 ||||| ||| | ||||| || |||| ||| ||||||||| | || | |||||||| Sbjct 2334 TTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTC 2275 Query 3278 TGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAAACTTCATTGGGTCAGTT 3337 | | | ||||| ||||||||||| || || || ||||||||||| || || || ||||| Sbjct 2274 TAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTT 2215 Query 3338 CTCTGGTCGCGTCCAACAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTCCTGAGCA 3397 |||||||| || ||||| |||| ||| ||| ||||| || |||| |||||||||||| Sbjct 2214 TTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCA 2155 Query 3398 TGGCGTAATTATGACTTTATCTGTTACTCGCTTCCCTCCTACT--CACGAAATGGAAATG 3455 |||| || | ||| | | || ||| || || |||||| || ||| || || Sbjct 2154 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATT 2097 Query 3456 CACTATCTCGTCGGTAAGGAATCTCTGACTTATACTGACATTGCCTGTGACCCTGCTCT- 3514 || || || || ||| | || |||||||||| || ||||| | ||||||| | | Sbjct 2096 CAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTG 2037 Query 3515 TATGGCTAACCTGCCTCCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTGCTGGT-- 3572 |||||| ||| |||| |||||||||||| | || || | || | |||| || | Sbjct 2036 TATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTC 1978 Query 3573 -ACTGGTAAATTCAAAATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACCGCGTTGC 3631 || || || || ||||| || ||||| ||||||||| | |||| ||| | Sbjct 1977 GTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTC 1918 Query 3632 CTTCC--CTTATAACGCTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGTCTAATGA 3688 ||| ||||| || |||||| |||||||| ||| |||| |||| ||| ||| ||| Sbjct 1917 --TCCTGCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGA 1861 Query 3689 TATTCTCGAACGTGTACTTGTTCGAACTGATAACTATGATGAAATCTTCCAGTCTATGCA 3748 | | | ||||| |||||| |||| || | ||||| | |||||||| | || Sbjct 1860 TTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCA 1801 Query 3749 ACTTGCACACTGGAACATGCAAACTAAATTTAACACTACTGTATATCGTCATATGCCTAC 3808 | || ||||| | || ||||||||| || || ||||| || |||| || Sbjct 1800 GTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGAC 1741 Query 3809 CACTCGTGATGGCATCATGA---CGTCATAAAA---------------CAAAACGTTGAA 3850 |||||| ||| ||||||| ||| |||||| | |||| ||| Sbjct 1740 CACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAA 1681 Query 3851 CGGGTACAAATTTTAATTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTTAGCTAAC 3910 |||| |||||||||||| |||| | |||||| ||||||||||||| ||| | Sbjct 1680 GCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTT 1621 Query 3911 TTACTTAAGGAAATT-CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960 | ||| |||| || |||||||||| |||| | | ||| |||||||| Sbjct 1620 CTGCTT-AGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 1571 Score = 179 bits (198), Expect = 1e-41 Identities = 658/1047 (63%), Gaps = 71/1047 (7%) Strand=Plus/Minus Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504 ||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || || Sbjct 1092 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 1035 Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564 |||| |||||||| | || ||| || || |||||| || || Sbjct 1034 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 975 Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618 |||| |||||||| |||| || ||||| || ||||| |||| || |||| | Sbjct 974 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 921 Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678 ||||||||| ||||| || ||||| || |||||| ||| || | | | || | || Sbjct 920 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 861 Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734 | | | | || || | | | || | |||| |||| || | | | | | | || Sbjct 860 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 801 Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783 ||||| || | |||| |||| | | || | ||||| | ||| Sbjct 800 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 741 Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 740 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 681 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 680 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 621 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 620 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 561 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 560 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 501 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 500 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 441 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 440 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 381 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 380 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 321 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263 |||| | ||||| ||||| | ||||| |||| |||| | || | Sbjct 320 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 274 Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323 | | | |||| | | || || | || || || Sbjct 273 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 243 Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383 | || || || |||||| | || |||||| | | ||| || |||||||| | || Sbjct 242 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 183 Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443 |||| ||||| ||| ||||||||||||| || |||||||||||||||| | ||||| Sbjct 182 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 123 Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470 || ||| | ||||| || |||| || Sbjct 122 CGGTAAAGCTGATGGTATTGGCTCTAA 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17441883774285