Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_014928.1 Length=1751 Score E Sequences producing significant alignments: (Bits) Value seq375 93.3 5e-16 seq2008 77.0 4e-11 >seq375 Length=19374 Score = 93.3 bits (102), Expect = 5e-16 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 615 CGTTATAATAGACGACTTCTATGGATGGATAAAGTACGACGAAATGCTGAAAATAATGGA 674 ||| || |||||||| || | || ||| |||| ||||||||| |||||||||| || Sbjct 5755 CGTCATCATAGACGATTTGCACGGTTGGCTAAAATACGACGAACTGCTGAAAATCTGTGA 5814 Query 675 CCGCTACCCATACAAGGTACAAATAAAAGGAGGATTTCAAGAATTC 720 ||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct 5815 CCGTTACCCATACAAAGTGGAAACAAAAGGAGGATACGAAGAATTC 5860 >seq2008 Length=13179 Score = 77.0 bits (84), Expect = 4e-11 Identities = 90/122 (74%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 615 CGTTATAATAGACGACTTCTATGGATGGATAAAGTACGACGAAATGCTGAAAATAATGGA 674 ||| || || |||||||||||||| ||| | |||||||||||| | || || || || Sbjct 3701 CGTAATCATCGACGACTTCTATGGCTGGCTCAAGTACGACGAACTACTAAAGATCTGCGA 3760 Query 675 CCGCTACCCATACAAGGTACAAATAAAAGGAGGATTTCAAGAATTCACATCAGAAAAAAT 734 ||| ||||| || || || | | ||||||||||| || | ||||| || || || | Sbjct 3761 CCGATACCCTTATAAAGTTGAGACCAAAGGAGGATTCGAAAAGTTCACCTCTCAACAAGT 3820 Query 735 TT 736 || Sbjct 3821 TT 3822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5494270926242