Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_014929.1 Length=1703 Score E Sequences producing significant alignments: (Bits) Value seq375 100 3e-18 seq2008 93.3 5e-16 >seq375 Length=19374 Score = 100 bits (110), Expect = 3e-18 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 616 GTCATCATAGACGATTTCTACGGATGGATAAAGTACGACGAACTCCTCAAAATAACTGAC 675 ||||||||||||||||| |||| ||| |||| ||||||||||| || ||||| |||| Sbjct 5756 GTCATCATAGACGATTTGCACGGTTGGCTAAAATACGACGAACTGCTGAAAATCTGTGAC 5815 Query 676 CGCTACCCATATAAAGTACAAATCAAAGGAGGATTTGAGGAGTTC 720 || |||||||| ||||| ||| |||||||||| || || ||| Sbjct 5816 CGTTACCCATACAAAGTGGAAACAAAAGGAGGATACGAAGAATTC 5860 >seq2008 Length=13179 Score = 93.3 bits (102), Expect = 5e-16 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 585 CTGGTGGGACGGTTATCATCAACAAGAAAATGTCATCATAGACGATTTCTACGGATGGAT 644 ||||||| |||| |||| | || | || ||||| ||||| ||||| || ||| | Sbjct 3671 CTGGTGGCACGGATATCTGCGGGAACCAGCCGTAATCATCGACGACTTCTATGGCTGGCT 3730 Query 645 AAAGTACGACGAACTCCTCAAAATAACTGACCGCTACCCATATAAAGTACAAATCAAAGG 704 |||||||||||||| || || || ||||| ||||| |||||||| | | |||||| Sbjct 3731 CAAGTACGACGAACTACTAAAGATCTGCGACCGATACCCTTATAAAGTTGAGACCAAAGG 3790 Query 705 AGGATTTGAGGAGTTCACATCAAAACGCATTTGG 738 |||||| || ||||||| || ||| ||||| Sbjct 3791 AGGATTCGAAAAGTTCACCTCTCAACAAGTTTGG 3824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5340674534594