Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_014930.1 Length=1760 Score E Sequences producing significant alignments: (Bits) Value seq375 109 6e-21 seq2008 93.3 5e-16 >seq375 Length=19374 Score = 109 bits (120), Expect = 6e-21 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 616 GTTATTATTGACGACTTCTACGGATGGATAAAATACGACGAACTACTGAAAATTTGCGAC 675 || || || ||||| || |||| ||| |||||||||||||||| |||||||| || ||| Sbjct 5756 GTCATCATAGACGATTTGCACGGTTGGCTAAAATACGACGAACTGCTGAAAATCTGTGAC 5815 Query 676 CGTTATCCTTACAAAGTACAAATAAAAGGGGGATTCGAAGAATTC 720 ||||| || |||||||| ||| |||||| |||| |||||||||| Sbjct 5816 CGTTACCCATACAAAGTGGAAACAAAAGGAGGATACGAAGAATTC 5860 >seq2008 Length=13179 Score = 93.3 bits (102), Expect = 5e-16 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 616 GTTATTATTGACGACTTCTACGGATGGATAAAATACGACGAACTACTGAAAATTTGCGAC 675 || || || ||||||||||| || ||| | || |||||||||||||| || || |||||| Sbjct 3702 GTAATCATCGACGACTTCTATGGCTGGCTCAAGTACGACGAACTACTAAAGATCTGCGAC 3761 Query 676 CGTTATCCTTACAAAGTACAAATAAAAGGGGGATTCGAAGAATTCA 721 || || ||||| ||||| | | ||||| ||||||||| | |||| Sbjct 3762 CGATACCCTTATAAAGTTGAGACCAAAGGAGGATTCGAAAAGTTCA 3807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5523070249676