Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_020206.1 Length=1719 Score E Sequences producing significant alignments: (Bits) Value seq375 100 3e-18 seq2008 78.8 1e-11 >seq375 Length=19374 Score = 100 bits (110), Expect = 3e-18 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 986 AATTCCTCGTATCCCCCTTTTACTGGTACTTTGTATGGGTATCGGTCGCATATTTTTAGT 1045 ||||| |||||||| |||||| | |||||||||||||| ||||| || ||||| || Sbjct 5859 AATTCTTCGTATCCTCCTTTTGTTTCCACTTTGTATGGGTAACGGTCACAGATTTTCAGC 5800 Query 1046 AGTTCGTCCCATTTTATCCATCCGTAGAAGTCGTCTATTATGACG 1090 |||||||| |||||| ||| |||| || |||||||| |||||| Sbjct 5799 AGTTCGTCGTATTTTAGCCAACCGTGCAAATCGTCTATGATGACG 5755 >seq2008 Length=13179 Score = 78.8 bits (86), Expect = 1e-11 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 1013 ACTTTGTATGGGTATCGGTCGCATATTTTTAGTAGTTCGTCCCATTTTATCCATCCGTAG 1072 ||||| || |||||||||||||| || |||||||||||||| | || | ||| || ||| Sbjct 3778 ACTTTATAAGGGTATCGGTCGCAGATCTTTAGTAGTTCGTCGTACTTGAGCCAGCCATAG 3719 Query 1073 AAGTCGTCTATTATGACG 1090 |||||||| || || ||| Sbjct 3718 AAGTCGTCGATGATTACG 3701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5391873331810