Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_023869.1 Length=1896 Score E Sequences producing significant alignments: (Bits) Value seq2008 91.5 2e-15 >seq2008 Length=13179 Score = 91.5 bits (100), Expect = 2e-15 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1028 AAGCCTCCTTTGATCGGTACTTTGTAGGGGTATCTGTCACAAATTTTGAGTAGGTCGTCG 1087 || ||||||||| || ||||| || ||||||| ||| || || || ||||| |||||| Sbjct 3796 AATCCTCCTTTGGTCTCAACTTTATAAGGGTATCGGTCGCAGATCTTTAGTAGTTCGTCG 3737 Query 1088 TATTTGATCCATCCGTAGAAGTCGTCTATAATTACACTTGTTTGTTGGTGGTATCCGTCC 1147 || |||| ||| || ||||||||||| || ||||| || || | | ||||||| | Sbjct 3736 TACTTGAGCCAGCCATAGAAGTCGTCGATGATTACGGCTGGTTCCCGCAGATATCCGTGC 3677 Query 1148 CACCA 1152 ||||| Sbjct 3676 CACCA 3672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5958260026012