Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_023874.1 Length=1790 Score E Sequences producing significant alignments: (Bits) Value seq375 93.3 5e-16 seq2008 89.7 6e-15 >seq375 Length=19374 Score = 93.3 bits (102), Expect = 5e-16 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 776 GTTATTATAGATGACTTCTATGGCTGGATAAAATACGATGAACTGCTGAAAATATGTGAC 835 || || ||||| || || | || ||| |||||||||| |||||||||||||| |||||| Sbjct 5756 GTCATCATAGACGATTTGCACGGTTGGCTAAAATACGACGAACTGCTGAAAATCTGTGAC 5815 Query 836 AGATACCCACACAAGGTTCCAATAAAAGGAGGATTCGAAGAGTT 879 | |||||| |||| || || ||||||||||| |||||| || Sbjct 5816 CGTTACCCATACAAAGTGGAAACAAAAGGAGGATACGAAGAATT 5859 >seq2008 Length=13179 Score = 89.7 bits (98), Expect = 6e-15 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 746 TGGTGGGACGGCTACATGCAGCAAACGTCTGTTATTATAGATGACTTCTATGGCTGGATA 805 |||||| |||| || ||| | || | | || || || || ||||||||||||||| | Sbjct 3672 TGGTGGCACGGATATCTGCGGGAACCAGCCGTAATCATCGACGACTTCTATGGCTGGCTC 3731 Query 806 AAATACGATGAACTGCTGAAAATATGTGACAGATACCCACACAAGGTTCCAATAAAAGGA 865 || ||||| ||||| || || || || ||| ||||||| | || ||| | |||||| Sbjct 3732 AAGTACGACGAACTACTAAAGATCTGCGACCGATACCCTTATAAAGTTGAGACCAAAGGA 3791 Query 866 GGATTCGAAGAGTTTAC 882 ||||||||| |||| || Sbjct 3792 GGATTCGAAAAGTTCAC 3808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5619067994456