Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_001270.2 Length=6825 Score E Sequences producing significant alignments: (Bits) Value seq876 1406 0.0 seq1656 854 0.0 seq1053 120 1e-23 seq999 102 4e-18 seq901 100 1e-17 seq477 100 1e-17 seq797 98.7 4e-17 seq912 96.9 2e-16 seq690 91.5 6e-15 >seq876 Length=69381 Score = 1406 bits (1558), Expect = 0.0 Identities = 955/1094 (87%), Gaps = 0/1094 (0%) Strand=Plus/Plus Query 2271 TTGATTAACTAACACAACTGCACATCattaaaataaatattgcaaaatttaaaataatat 2330 || |||||||| || |||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct 65629 TTTATTAACTATCATAACTGCACATCACTAAAATAGATATTGCAAAATTAAAAATAATAT 65688 Query 2331 attacaatcaaattaactttcaaatataaaCACTTAATTATATTGAAAGTTTCAAACTAT 2390 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 65689 ATTACAATAAAAATAACTTTCAAATATAAACACTTAATTATATTGAAAGTTTCAAACTTT 65748 Query 2391 TTATAGTTTCCTTGGACGGAACTTTTAAATGTAATTTAGTGtttttttATTTGGAAGGAG 2450 ||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||| Sbjct 65749 TTATAGTTTCCCGCTAAGAAACTTTTAAATGTAATTAAGTGTTTTTTTATTTGGAAGGAG 65808 Query 2451 TTTATAAAAATGAATAATGTTTTTATTCAAGATAATTTAACAAATAAACGTCATAATGTA 2510 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 65809 TTTATAAAAATGAATAATGTTTTTATTCAAGATAATTTAACAAATAAAGGTCATAATGTA 65868 Query 2511 TTTATGAATGCTTTAAATTATGTTAAAAAAGAATNNNNNNNNNNNNNNNNNNNNNNTGGT 2570 ||||||||| ||||||||||||||||||||||| |||| Sbjct 65869 ATTATGAATGATTTAAATTATGTTAAAAAAGAATATTATTTAAAAAAAGTCTTTTATGGT 65928 Query 2571 AATTATGTTAAAAATATTGTTTTACCACTAGAATTAGTtaataataatcctcgtaataaa 2630 |||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||| Sbjct 65929 AATTATGTTAAAAATATTGTCTTACCGTTAGAATTAATTAATAATAACCCTCGTAATAAA 65988 Query 2631 atgggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCGCTCG 2690 | |||| ||||||||||||||||||||||||||||| | || |||| ||| |||||| | Sbjct 65989 ACGGGAATTAAAAATACTGGAAAAAATGATAAAAAACTATGAAATAATCGCATTCGCACC 66048 Query 2691 CAAGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTT 2750 ||||||||||||||||| ||||| ||| | ||||||| ||||| ||||||||||||||| Sbjct 66049 CAAGGAAATTGTATTCGCAAAGCGTATCATAATTTTTCAAATTCAAAAAATTTAAGTTTT 66108 Query 2751 TTGACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAG 2810 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 66109 CTGACTTTAACTTATGCAGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAG 66168 Query 2811 TTATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAA 2870 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 66169 TTATTTTTTAATAATATTAATCGTTGATGAAACAATCCTATTCGTTCTAAACATCATAAA 66228 Query 2871 GGAATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCAT 2930 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 66229 GGAATTTTAAAATATATGTATACTTATGAGTATCAAAAACGAGGAGCAGTTCACTTTCAT 66288 Query 2931 ATCATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAATACTGAAAACACGGTATT 2990 |||||||| || |||||||||||||| ||||| ||||||||||| |||||| | |||||| Sbjct 66289 ATCATATTGAATCAAAAAATACCTAATAGTGTAGTACAACAATATTGAAAATATGGTATT 66348 Query 2991 AATAAAAATATTAAAGTTCGTGCAGGTTCTAATGAAGATGTTGTNNNNNNNNNNNNNNNN 3050 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 66349 AATAAAAATATTAAAGTTCGTGCAGGTTCTAATGAAGATGTTGTTAAATATCTTGCTAAA 66408 Query 3051 NNNNNNNNNNNNACTGCTAATAATGATAAGTCCCAAAATCATTATGATTTAAACATTAAA 3110 |||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 66409 TATATTGTAAAAACTGCTAATAATGATAAGTCGCAAAATCATTATGATTTAAATATTAAA 66468 Query 3111 GCGTATCAATTTAGTAAAAATTGTAAAAATCCAAAGGTTAAAGTCGGTGTTATTGAATTA 3170 ||||||||||||||||||||||||||||| |||| || || || || ||| |||| ||| Sbjct 66469 GCGTATCAATTTAGTAAAAATTGTAAAAACCCAAGAGTAAAGGTTGGAGTTGTTGAGTTA 66528 Query 3171 TCTGAACAAGATTTAATTTATTCAGTTAAAGATAACTTAAATTATTTTTCTTTTTGTGAT 3230 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| Sbjct 66529 TCTGAACAAGATTTAATTTATTCAGTTAAAGATAACTTAAATTATTTTGCTTTTGGCGAT 66588 Query 3231 AAAAATGGNNNNNNNNNNNNNNNTAGTTGTGATAGTTATTATGGTTTAGATAAATTTAGA 3290 |||| | |||||||||||||||||||||||||||||| |||||| Sbjct 66589 GAAAACAGTTATAAAATTGGTTTTAGTTGTGATAGTTATTATGGTTTAGATAAGTTTAGA 66648 Query 3291 GAATTTAAAAAATATGTTTCTGCTGATAGAAAAATATTTAGAAATTTAGTTAAAAATACT 3350 |||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 66649 GAATATAAAAAATATGTTTCTGTTGATAGAAAAATATTTAAAAATTTAGTTAAAAATACT 66708 Query 3351 AATTTTACTGTTAA 3364 |||||||||| ||| Sbjct 66709 AATTTTACTGCTAA 66722 Score = 1005 bits (1114), Expect = 0.0 Identities = 752/888 (85%), Gaps = 46/888 (5%) Strand=Plus/Plus Query 3663 aaaaataaaaaaatgagttaaaaactcattaaaaaaTGTGGCAATTGCCTTGGACAACAA 3722 |||| |||||||||||||||||||||||||||||| |||||| || || | ||||| Sbjct 66746 AAAATTAAAAAAATGAGTTAAAAACTCATTAAAAA--GTGGCAGTTACCCGCTAAAACAA 66803 Query 3723 TTACCACAAATTAATTAAAACaaaaaaa----------CAAGTTTAG-atttatatttta 3771 | ||||||||||||||||||||||||| |||||| | || ||||||||| Sbjct 66804 CTGCCACAAATTAATTAAAACAAAAAAAAAAAAAAAAACAAGTTGGGGATGTATATTTTA 66863 Query 3772 t---------------------------ttgacaatttcaatttttgttgtattattgaa 3804 | |||||||||| ||||||| |||||||||| || Sbjct 66864 TAATATCTTTATTTTTTGTGCTGAAAATTTGACAATTTTAATTTTTATTGTATTATTAAA 66923 Query 3805 ttaacttaaacatttaattaTGTTTGAGTTTCAAATCTTAAAAGGTTTCCTTGGACGGAA 3864 ||||||||||||||| |||||||||||||||||||||||||||||||||| | | || Sbjct 66924 TTAACTTAAACATTTGATTATGTTTGAGTTTCAAATCTTAAAAGGTTTCCCGCTAAGAAA 66983 Query 3865 CTTAAATATAATTAAATGtttttttatgctt-atttataaact-ttatttaaacaaaaaa 3922 |||| |||||||||||||||||||||||||| ||||||||| ||||| ||| |||||| Sbjct 66984 CTTAGATATAATTAAATGTTTTTTTATGCTTTATTTATAAAAACTTATTCAAATAAAAAA 67043 Query 3923 cactaattttttattatNNNNNNNNNNNNNNNNNNTTTTATATTTAAGTTTCAAACCTGA 3982 |||||||||| |||||| |||||||||||||||| |||||||| Sbjct 67044 CACTAATTTTGTATTATTATTTTTAATTAATCATTTTTTATATTTAAGTTTTAAACCTGA 67103 Query 3983 AATCTTTTAAG-AATCTATATAGATT-TTTAAAAGAAA--GGAGAAATCTTATGAATGGA 4038 ||||||||||| ||| || || ||| ||||||||||| |||||||||||||||||||| Sbjct 67104 AATCTTTTAAGTAATTTAATTAAATTATTTAAAAGAAAAAGGAGAAATCTTATGAATGGA 67163 Query 4039 TTTCTAGTACAGTTGATAGATATTGCAACGGGTAAAATTATTAAAGATGACAAAGGTAAT 4098 |||||||||||||||||||||||| |||| | |||||||||||| ||||| ||||||||| Sbjct 67164 TTTCTAGTACAGTTGATAGATATTTCAACTGATAAAATTATTAAGGATGATAAAGGTAAT 67223 Query 4099 GAAAGTAAATGAGATAGTTATACATTTACACCAGTTATTAAATTAGAAAATGGTACTGTT 4158 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 67224 GAAAGTAAATGAGATAGTTATACATTTACACCAGTTATTAAGTTAGAAAATGGTACTGTT 67283 Query 4159 AAAGGTACAAAAGATTTGTCAAAATCAAAATGATTTAAAATAACTGATGAAAATTATTTA 4218 ||||||||||||||||| ||||| ||||||||||||||| ||| |||||| |||||||| Sbjct 67284 AAAGGTACAAAAGATTTATCAAAGTCAAAATGATTTAAAGTAATTGATGATAATTATTTG 67343 Query 4219 GAATTAAAACCTTATTTAATTGATGGTAATTTATTTTATGTTTCGCTTAAATGGGATGGA 4278 ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 67344 AAATTAAAACCTTATTTAGTTGATGGTAATTTATTTTATGTTTCGCTTAAATGAGATGGA 67403 Query 4279 AAAATTAATATTGTTGAACCATATACAGAAAATTATAACGAGCAAGAATTCATTAACAAA 4338 |||||||||| |||||||||||| ||||||| ||| ||||||||| || ||||||||| Sbjct 67404 AAAATTAATACAGTTGAACCATATGTAGAAAATAATAGCGAGCAAGATTTTATTAACAAA 67463 Query 4339 TATTCTAATAATTCATCAATAACAGAAAGCAATAGTTAATATGAAACAACAATTATGTAT 4398 |||||||||| |||| ||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct 67464 TATTCTAATAGTTCAACAATATCAGAAAGTAATAGTTAATATGAAACAACAGTTATGTAT 67523 Query 4399 TGTTTGTATTAATGATACTGTTTGAGAAAATGGATCTCGTTATTGTTGAAATTGTGTTAA 4458 |||||||||||||||||||||||||||||||| || |||||| ||||| |||||||| Sbjct 67524 GGTTTGTATTAATGATACTGTTTGAGAAAATGGTCCTACTTATTGCTGAAACTGTGTTAA 67583 Query 4459 TGAAAATGTTATTTTAATTAATCAATATTATTCTAGGTTAGAAAATGA 4506 |||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct 67584 TGAAAATGTTGTTTTAATTAATCAATATTATTCTAGGTTAAACAATGA 67631 Score = 165 bits (182), Expect = 4e-37 Identities = 99/104 (95%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4655 AATGAAAAAGCAAACTAAGTTATATAAACAACGATTAAAATATTTGGTTAATGTTATACA 4714 ||||||||| |||||||| |||||||||||||||||| ||||||| |||||||||||||| Sbjct 67627 AATGAAAAAACAAACTAAATTATATAAACAACGATTAGAATATTTAGTTAATGTTATACA 67686 Query 4715 TCAATGTTTACCTACTAAAATACCATTATTTATGTTAAGAAAAG 4758 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 67687 TCAATGTTTACCTAGTAAAATACCATTATTTATGTTAAGAAAAG 67730 Score = 116 bits (128), Expect = 2e-22 Identities = 128/168 (76%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 5455 TGGTGTTCTTGCTGATTGGGCGATTGCTTTTACTAACTGATTTATCGGTTTTTTAGGGTC 5514 ||||||| |||| |||| |||| | ||||| | |||||| | |||||||| | Sbjct 68537 TGGTGTTATTGCAAATTGAGCGAAAGAATTTACGACTTGATTTTTAACATTTTTAGGTGC 68596 Query 5515 ACATATGTTATTAATTATTCCGTTAGTTTTAATGTTTGTGGTTTTAGGAATTGAAACAAT 5574 | || | ||||||||||| | |||||||||||| | || | |||||||||||| | Sbjct 68597 AAATGCAATTTTAATTATTCCTATTGTTTTAATGTTTTTAGTGCTTGGAATTGAAACATT 68656 Query 5575 CAGAAAGTTAATTCACGGATATTAATATT--TAATAATAAA-CTCTAA 5619 ||||| |||||||||||||||||||||| |||| |||| |||||| Sbjct 68657 AAGAAAATTAATTCACGGATATTAATATTAATAATTTTAAACCTCTAA 68704 >seq1656 Length=30388 Score = 854 bits (946), Expect = 0.0 Identities = 612/703 (87%), Gaps = 7/703 (1%) Strand=Plus/Plus Query 3811 taaacatttaattaTGTTTGA-GTTTCAAATCTTAAAAGGTTTCCTTGGACGGAACTTAA 3869 |||||| |||||||| || | |||||||| || | |||||| | | |||||| Sbjct 17312 TAAACACTTAATTATATTGAAAGTTTCAAACTTTTTATAGTTTCCCGCTAAGAAACTTAG 17371 Query 3870 ATATAATTAAATGtttttttatgctt-atttataaact-ttatttaaacaaaaaacacta 3927 |||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||| Sbjct 17372 ATATAATTAAATGTTTTTTTATGCTTTATTTATAAAAACTTATTCAAATAAAAAACACTA 17431 Query 3928 attttttattatNNNNNNNNNNNNNNNNNNTTTTATATTTAAGTTTCAAACCTGAAATCT 3987 ||||| |||||| |||||||||||||||| ||||||||||||| Sbjct 17432 ATTTTGTATTATTATTTTTAATTAATCATTTTTTATATTTAAGTTTTAAACCTGAAATCT 17491 Query 3988 TTTAAG-AATCTATATAGATT-TTTAAAAGAAA--GGAGAAATCTTATGAATGGATTTCT 4043 |||||| ||| || || ||| ||||||||||| | ||||||||||||||||||||||| Sbjct 17492 TTTAAGTAATTTAATTAAATTATTTAAAAGAAAAAGAAGAAATCTTATGAATGGATTTCT 17551 Query 4044 AGTACAGTTGATAGATATTGCAACGGGTAAAATTATTAAAGATGACAAAGGTAATGAAAG 4103 ||||||||||||||||||| |||| | |||||||||||| ||||| |||||||||||||| Sbjct 17552 AGTACAGTTGATAGATATTTCAACTGATAAAATTATTAAGGATGATAAAGGTAATGAAAG 17611 Query 4104 TAAATGAGATAGTTATACATTTACACCAGTTATTAAATTAGAAAATGGTACTGTTAAAGG 4163 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 17612 TAAATGAGATAGTTATACATTTACACCAGTTATTAAGTTAGAAAATGGTACTGTTAAAGG 17671 Query 4164 TACAAAAGATTTGTCAAAATCAAAATGATTTAAAATAACTGATGAAAATTATTTAGAATT 4223 |||||||||||| ||||| ||||||||||||||| ||| |||||| |||||||| |||| Sbjct 17672 TACAAAAGATTTATCAAAGTCAAAATGATTTAAAGTAATTGATGATAATTATTTGAAATT 17731 Query 4224 AAAACCTTATTTAATTGATGGTAATTTATTTTATGTTTCGCTTAAATGGGATGGAAAAAT 4283 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 17732 AAAACCTTATTTAGTTGATGGTAATTTATTTTATGTTTCGCTTAAATGAGATGGAAAAAT 17791 Query 4284 TAATATTGTTGAACCATATACAGAAAATTATAACGAGCAAGAATTCATTAACAAATATTC 4343 ||||| |||||||||||| ||||||| ||| ||||||||| || |||||||||||||| Sbjct 17792 TAATACAGTTGAACCATATGTAGAAAATAATAGCGAGCAAGATTTTATTAACAAATATTC 17851 Query 4344 TAATAATTCATCAATAACAGAAAGCAATAGTTAATATGAAACAACAATTATGTATTGTTT 4403 ||||| |||| ||||| ||||||| ||||||||||||||||||||| |||||||| |||| Sbjct 17852 TAATAGTTCAACAATATCAGAAAGTAATAGTTAATATGAAACAACAGTTATGTATGGTTT 17911 Query 4404 GTATTAATGATACTGTTTGAGAAAATGGATCTCGTTATTGTTGAAATTGTGTTAATGAAA 4463 |||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| Sbjct 17912 GTATTAATGATACTGTTTGAGAAAATGGTCCTACTTATTGCTGAAACTGTGTTAATGAAA 17971 Query 4464 ATGTTATTTTAATTAATCAATATTATTCTAGGTTAGAAAATGA 4506 ||||| ||||||||||||||||||||||||||||| | ||||| Sbjct 17972 ATGTTGTTTTAATTAATCAATATTATTCTAGGTTAAACAATGA 18014 Score = 670 bits (742), Expect = 0.0 Identities = 1317/1961 (67%), Gaps = 71/1961 (4%) Strand=Plus/Plus Query 241 ATGGTGCCATTAATGTTGTAGTCGATATTTTTATGAAAATTATGGATTGAATGTGAGCAT 300 ||| ||| |||||||||| | ||||| ||||||||||||||||| || |||||| | | Sbjct 20476 ATGATGCTTTTAATGTTGTTATTGATATATTTATGAAAATTATGGACTGGATGTGAACTT 20535 Query 301 TAAAATTGCCTGGTACAAATATTCCTTTATTTGTAATTTGAGTAATTGGTGGTGTTATAA 360 ||||||| || | ||| |||| ||||||| ||| ||||| | || || ||| || || Sbjct 20536 TAAAATTACCAGCAACAGATATACCTTTATATGTTCTTTGAATTATAGGGGGTATTTTAG 20595 Query 361 ATGTTATTTTGTTATTAGTTAATAGTTCTCGTGGTTTAAGTTCAGTTTCTCGTTCATCTT 420 || || || || ||| | | | | |||||| || | |||| || Sbjct 20596 GAATTGTTATGCGTTTGGTTGGTTCTGCACCACAATTAAGTACAATGTCTCAAAATACTA 20655 Query 421 TACAAGCA-----AGTAA--GCAAATATCTAAGGGGGTtaaaaatataagtaatgattct 473 ||||||| || || | ||| || || ||| | |||| || || | Sbjct 20656 AACAAGCAGCAGGAGCAATTGGAAAAATAAAACTTGGT-ATAAATGAAACAGATAA---- 20710 Query 474 aaaagtgataataaggagagtaataaataatgattaagttaaTATTTTTCTTTGTTATTG 533 | ||| | | || | || || |||||||| |||| ||| ||| || ||| | | | Sbjct 20711 -AGAGTTTTCAAAA--AAAGGAAAAAATAATGGTTAAATTATTATGGTTTTTTTTCGTAG 20767 Query 534 GTTTAACTGTTGGTTTTGGTTTTATTGCTAATATTGTTATGGCAACAGATTTAGGTTTTT 593 | | ||||| | ||| |||| |||||| || | || |||| || | Sbjct 20768 CAAGTATTATTGGTATAACATTTGTTGCAAATATTTTTTTAGCGTCAGAGACAGCAATGG 20827 Query 594 CAACTGTTAAACATT-ATTTAGAATCTGCTAACGATTTTTATAAATTGGTAGCACATTTA 652 | || ||||||| | ||||| | | | || |||||||||||||| | || |||||| Sbjct 20828 CGACAATTAAACAGTGATTTAATAGTT-CAAATGATTTTTATAAATTAATCGCTCATTTA 20886 Query 653 TTTATTATTGCGACACATCCTATTTTTCAGTTATATATTGCGTTTGGAATTATCATTATG 712 |||||||| || || |||||||||||| |||| |||||| ||||||||||| | ||| Sbjct 20887 TTTATTATAGCAACTCATCCTATTTTTAGATTATTTATTGCTTTTGGAATTATGTTAATG 20946 Query 713 GGAATTAGACTTATTTTTA---TTGCATAGGAGGTTAAA-ACA-ATGCGAAAACGattat 767 || ||| |||| ||| || ||| || ||| ||| || ||||| || | Sbjct 20947 ATTATAAGAGTTATATTTGCAGTTAGATAAGAAAGGAAATACAGATATGAAAAAAGTTTT 21006 Query 768 tag-atgtatttat-tgttttttatttaatatttggttgaatatttcttttttgTGGTAC 825 || || ||||| | |||| ||| |||| ||||| || ||||| || |||| | || Sbjct 21007 TATTATTTATTTTTATGTTATTTTTTTATTATTTTCTTTAATATCTCCTTTTGTTTTTA- 21065 Query 826 TGTAACAACTAAT------AATTTTAGCAA------TACCTATAAATTGTATT------- 866 ||||| ||||| ||||||| || | || || || |||| Sbjct 21066 --TAACATCTAATTTAGATAATTTTAATAAAGTTAATTCCAATTTTTTATATTCAGAAAA 21123 Query 867 --TAAAAAATAATGATACTTTTAAAGAATTAACTTATGACAAAGCAAATGAATATGATTT 924 |||||| |||||||| ||||||||| | || |||| | |||| | |||||||||||| Sbjct 21124 TTTAAAAAGTAATGATATTTTTAAAGATTGAAATTATAAAGAAGCGAGTGAATATGATTT 21183 Query 925 CCAGTCTACTTTAATGCTACGACAAGACTATTTTATGCAAGGTTTAGATCCTAGTAATTA 984 || |||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct 21184 TCAATCTAGTTTAATGTTGCGACAAGACTATTTTATGCAAGGTTTAGACCCTAGTAATTA 21243 Query 985 TGCATTTAGTTTTGGTATT-AAATTGGGTGG--TTGAGATGGTTTAAGTGCTGATAAAAA 1041 ||| |||||||||||| || ||| | | || | ||| | |||||||||||||| Sbjct 21244 TGCGTTTAGTTTTGGTGTTGAAACTCCTTTTATTTCAAATG---TGAGTGCTGATAAAAA 21300 Query 1042 TGATAATAATTATTGATTTAAACTTTTTACAACAAATTATAGGAGTTATGAAATTACTTG 1101 |||| |||||||||||||||| ||| || | | | | | |||| | | | ||| Sbjct 21301 TGATGATAATTATTGATTTAATAAAATTAAAAACAGTGCTTGAAATTATAGATTAAGTTG 21360 Query 1102 AAATTCACAAGATATTTCAAAGGGATGACAAGGAAAATTAATTTTAGATGATGATAGTAC 1161 ||||| | | ||| ||| ||| | | ||| | ||||||| ||||| || | | | Sbjct 21361 AAATTTAGCAAATAGTTCTAAGAGTTCCGTAGGTAGATTAATTGTAGATTATCAAATGTC 21420 Query 1162 TGGTAGATTTTTAAAAATTATTGTTTATAAAAATNNNNNNNNNNNNNNNNNNNNNNNTAA 1221 || ||| ||||| ||| |||||||||||||| ||| Sbjct 21421 AACTAAATTATTAAATATTTTTGTTTATAAAAATGATGTAAAATATGAATTCACTTTTAA 21480 Query 1222 TATAGATATATTTGAATATTTATTTTTTCCTATTGTTTCCAATCAAAGTTATAGACATTT 1281 | ||| ||| | |||||| ||| | || ||| || |||||||||||| | ||||| Sbjct 21481 TTGAGAAATAATACCATATTTGTTTATGCCGATTATTGGTAATCAAAGTTATCGGCATTT 21540 Query 1282 TGATTTGGATTATTTAATTTTTNNNNNNNNNNNNNNAAATTTAATTAATATGGANNNNNN 1341 |||| || | |||||| |||| ||| ||||||||||||| Sbjct 21541 TGATATGAACTATTTAGTTTTAAATTTTAATTATAAAAAAATAATTAATATGGATATTCT 21600 Query 1342 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGTTAAGCAAGATACtttttctttgga 1401 |||||||| ||| || || || || || Sbjct 21601 TAAAAAATCTGAAAGTAATTATTATATTAATGATGTTAAACAAAATTTTTATTTATTAGA 21660 Query 1402 aagtttttttcaaattttagattatttttattctaatattttaagagttatatttgatat 1461 | ||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 21661 TAATTTATTTCAAATTTTAGATTATTTTTATTCTAATGTTTTAAGAACTATATTTGATAT 21720 Query 1462 ttctaattttaaagaatttatttattttaattCTTCTAACGAGAATACTGGTTTTGCTNN 1521 ||| ||||||||||| ||||||||| ||| ||| | ||| ||||||| Sbjct 21721 TTCAAATTTTAAAGAGCAGATTTATTTTTCATCTGATAATGGTAATTTAGGTTTTGTATT 21780 Query 1522 NNNNNNNNNNNNNNNNNNNNTATTATATCCAAAATCAATGCTTTTTAATATTTTAAGATT 1581 |||||||||||||||||||||||||||||||||||||||| Sbjct 21781 TTTTATAAAAAATGGTTTTTTATTATATCCAAAATCAATGCTTTTTAATATTTTAAGATT 21840 Query 1582 CCCTGATTTATCAGCAACTTATTTAAACCCAATAGTTAATTTATATAATGCTTATAATAT 1641 || ||| | | ||||||| | || ||| | |||||||||||||||| ||| Sbjct 21841 TCCGGATACAGTTTCGGGTTATTTAGAACCGCAAGTGCAATTATATAATGCTTATACTAT 21900 Query 1642 AAATGTTAATCAAAATTATTATTCTNNNNTTTCAAATTGACAATATCAAACTGATATTTT 1701 |||| || | | |||||| |||| |||||||||| | ||| |||||||| |||| Sbjct 21901 AAATAATACTAATGATTATTTTTCTTATTATTCAAATTGAGATTATAAAACTGATGTTTT 21960 Query 1702 GCCTTCTAATAATGATAAGTATACTCAATCAATAAAATTATTAGATATGACAGATAAATC 1761 |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || Sbjct 21961 GCCTTCTAATAATGATAAATATACTCAATCAATAAAATTATTAGATATGGCAGATAATTC 22020 Query 1762 AAAATATCAAGGTTTTAATTTGATTACTTTTAATGCTATTAATATTGGTA-AAGATAGT- 1819 ||||||||||||||||||||| |||| |||||| | | | | ||| | || | ||| Sbjct 22021 AAAATATCAAGGTTTTAATTTAATTAGATTTAATACGACT-AGATTAACAGAAAAAAGTG 22079 Query 1820 CTATTTCAGTTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTGAAATAATGAAA 1879 ||| || || ||||||||| |||||| Sbjct 22080 GCATTGCAATTTTGGGTTTTAATTTTAGCATTTATAATGCTATGGATTGAAATGATGAAA 22139 Query 1880 TTAATAATGGTAATATTTGACGAATACCATATAAAAGTTGTAGTTGATATAATTTAGCGT 1939 ||||| |||| |||| ||| | |||| |||| ||||| |||||||||| | | Sbjct 22140 TTAATGCTGGTGATATATGAAAATTACCTTATAGTTCTTGTACTTGATATAATGTGTTTT 22199 Query 1940 GTCATATACAAAATGCGGCGATTTGATTGGTAAATAATTTGCCTGGTATGAAAGATGTAT 1999 |||||||| |||||| |||||| | |||| |||||||||||| ||||| || Sbjct 22200 GTCATATAAAAAATGGTTTTATTTGAGCATTTAATACTTTGCCTGGTATTAAAGAGGTTG 22259 Query 2000 ATAATTTTATTAATGGGATAGTAACATGTATTTAGCAATGTGTCTGAGTTGTTT---AAT 2056 || | | ||||| |||||| || | | |||| ||| | | || || || Sbjct 22260 GAAAGTATGCTAATGCATTAGTAA-ATACAAT--GCAAAATGT-TAATTTACTTTGAGAT 22315 Query 2057 AATATTGGTAATTTATTTGCCTTTGATATTAACATTTAAGATTA-TGTTAAGTTCTATT- 2114 ||||| ||||||| ||||| ||||||||| | ||||| |||| || | | | ||| Sbjct 22316 AATATAAGTAATTTCTTTGCTTTTGATATT-GCTTTTAA-ATTATTGCTTGGGGCAATTA 22373 Query 2115 TTAGTGTTAGCGATGGTTAATGGACTTTTACGCTATTTTTA 2155 ||| | || |||||| ||||||| ||||||| ||||||| Sbjct 22374 TTACTCTT-GCGATGTTTAATGGTATTTTACG--ATTTTTA 22411 Score = 210 bits (232), Expect = 9e-51 Identities = 149/170 (88%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 2271 TTGATTAACTAACACAACTGCACATCattaaaataaatattgcaaaatttaaaataatat 2330 || |||||||| || |||||||||||| ||||||| ||||||||||||| |||||||||| Sbjct 17226 TTAATTAACTATCATAACTGCACATCACTAAAATAGATATTGCAAAATTAAAAATAATAT 17285 Query 2331 attacaatcaaattaactttcaaatataaaCACTTAATTATATTGAAAGTTTCAAACTAT 2390 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 17286 ATTACAATAAAAATAACTTTCAAATATAAACACTTAATTATATTGAAAGTTTCAAACTTT 17345 Query 2391 TTATAGTTTCCTTGGACGGAACTTTTAAATGTAATTTAGTGtttttttAT 2440 ||||||||||| | | ||| ||| || ||||| | ||||||||||| Sbjct 17346 TTATAGTTTCCCGCTAAGAAAC--TTAGATATAATTAAATGTTTTTTTAT 17393 Score = 165 bits (182), Expect = 4e-37 Identities = 99/104 (95%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4655 AATGAAAAAGCAAACTAAGTTATATAAACAACGATTAAAATATTTGGTTAATGTTATACA 4714 ||||||||| |||||||| |||||||||||||||||| ||||||| |||||||||||||| Sbjct 18010 AATGAAAAAACAAACTAAATTATATAAACAACGATTAGAATATTTAGTTAATGTTATACA 18069 Query 4715 TCAATGTTTACCTACTAAAATACCATTATTTATGTTAAGAAAAG 4758 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 18070 TCAATGTTTACCTAGTAAAATACCATTATTTATGTTAAGAAAAG 18113 Score = 116 bits (128), Expect = 2e-22 Identities = 128/168 (76%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 5455 TGGTGTTCTTGCTGATTGGGCGATTGCTTTTACTAACTGATTTATCGGTTTTTTAGGGTC 5514 ||||||| |||| |||| |||| | ||||| | |||||| | |||||||| | Sbjct 18920 TGGTGTTATTGCAAATTGAGCGAAAGAATTTACGACTTGATTTTTAACATTTTTAGGTGC 18979 Query 5515 ACATATGTTATTAATTATTCCGTTAGTTTTAATGTTTGTGGTTTTAGGAATTGAAACAAT 5574 | || | ||||||||||| | |||||||||||| | || | |||||||||||| | Sbjct 18980 AAATGCAATTTTAATTATTCCTATTGTTTTAATGTTTTTAGTGCTTGGAATTGAAACATT 19039 Query 5575 CAGAAAGTTAATTCACGGATATTAATATT--TAATAATAAA-CTCTAA 5619 ||||| |||||||||||||||||||||| |||| |||| |||||| Sbjct 19040 AAGAAAATTAATTCACGGATATTAATATTAATAATTTTAAACCTCTAA 19087 >seq1053 Length=33701 Score = 120 bits (132), Expect = 1e-23 Identities = 212/297 (71%), Gaps = 14/297 (5%) Strand=Plus/Minus Query 1864 GATTGAAATAATGAAATTAATAATGGTAATATTTGACGAATACCATATAAAAGTTGTAGT 1923 ||||||||| ||||||||||| |||| |||| ||| | |||| |||| ||||| | Sbjct 33677 GATTGAAATGATGAAATTAATGCTGGTGATATATGAAAATTACCTTATAGTTCTTGTACT 33618 Query 1924 TGATATAATTTAGCGTGTCATATACAAAATGCGGCGATTTGATTGGTAAATAATTTGCCT 1983 ||||||||| | ||||||||| |||||| |||||| | |||| ||||||| Sbjct 33617 TGATATAATGTGTTTTGTCATATAAAAAATGGTTTTATTTGAGCATTTAATACTTTGCCT 33558 Query 1984 GGTATGAAAGATGTATATAATTTTATTAATGGGATAGTAACATGTATTTAGCAATGTGTC 2043 ||||| ||||| || || | | ||||| |||||| || | | |||| ||| Sbjct 33557 GGTATTAAAGAGGTTGGAAAGTATGCTAATGCATTAGTAA-ATACAAT--GCAAAATGT- 33502 Query 2044 TGAGTTGTTT---AATAATATTGGTAATTTATTTGCCTTTGATATTAACATTTAAGATTA 2100 | | || || ||||||| ||||||| ||||| ||||||||| | ||||| |||| Sbjct 33501 TAATTTACTTTGAGATAATATAAGTAATTTCTTTGCTTTTGATATT-GCTTTTAA-ATTA 33444 Query 2101 -TGTTAAGTTCTATT-TTAGTGTTAGCGATGGTTAATGGACTTTTACGCTATTTTTA 2155 || | | | ||| ||| | || |||||| ||||||| ||||||| ||||||| Sbjct 33443 TTGCTTGGGGCAATTATTACTCTT-GCGATGTTTAATGGTATTTTACG--ATTTTTA 33390 >seq999 Length=42181 Score = 102 bits (112), Expect = 4e-18 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 1909 TATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCGGCGATTTGATTG 1968 ||| ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||| | Sbjct 40485 TATGAAAGTTGTACTTGATATAATTTAGCTTGTCATATAAAAAATGCGGCAATTTGAGTT 40426 Query 1969 GTAAATAATTTGCCTGGTATGAAA 1992 ||||||||| | |||||| | ||| Sbjct 40425 GTAAATAATATTCCTGGTGTTAAA 40402 >seq901 Length=67329 Score = 100 bits (110), Expect = 1e-17 Identities = 89/110 (81%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 1897 TGACGAATACCATATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCG 1956 |||| | || |||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 66185 TGACAAGCACAATATGAAAGTTGTAGTTGATATAATTTAGCGTGTCATATCAGAAATGCT 66126 Query 1957 GCGATTTGATTGGTAAATAATTTGCCTGGTATGAAAGATGTATAT-AATT 2005 || |||||| | || |||||| | |||||| | ||| | ||| || |||| Sbjct 66125 GCAATTTGAATTGTCAATAATATTCCTGGTGTAAAACAAGTAAATGAATT 66076 >seq477 Length=240241 Score = 100 bits (110), Expect = 1e-17 Identities = 89/110 (81%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 1897 TGACGAATACCATATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCG 1956 |||| | || |||| |||||||||||||||||||||||||||||||||| | |||||| Sbjct 1188 TGACAAGCACAATATGAAAGTTGTAGTTGATATAATTTAGCGTGTCATATTCGAAATGCT 1247 Query 1957 GCGATTTGATTGGTAAATAATTTGCCTGGTATGAAAGATGTATAT-AATT 2005 || |||||| | || |||||| | ||||| | ||| | ||| || |||| Sbjct 1248 GCAATTTGAATTGTCAATAATATTCCTGGGGTAAAACAAGTAAATGAATT 1297 Score = 98.7 bits (108), Expect = 4e-17 Identities = 82/99 (83%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 1908 ATATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCGGCGATTTGATT 1967 |||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||| | Sbjct 166088 ATATGAAAGTTGTAGTTGATATAATTTAGCGTGTTATATGAAAAATGCGGCAATTTGAAT 166029 Query 1968 GGTAAATAATTTGCCTGGTATGAAAGATGTATAT-AATT 2005 || |||||| | ||| || | ||| | ||| || |||| Sbjct 166028 TGTGAATAATATTCCTAGTGTAAAACAAGTAAATGAATT 165990 >seq797 Length=92859 Score = 98.7 bits (108), Expect = 4e-17 Identities = 82/99 (83%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 1908 ATATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCGGCGATTTGATT 1967 |||| ||||||||||||||||||||||||||||| |||| |||||||||| |||||| | Sbjct 91986 ATATGAAAGTTGTAGTTGATATAATTTAGCGTGTTATATGAAAAATGCGGCAATTTGAAT 91927 Query 1968 GGTAAATAATTTGCCTGGTATGAAAGATGTATAT-AATT 2005 || |||||| | ||||| | ||| | ||| || |||| Sbjct 91926 TGTGAATAATATTTCTGGTGTAAAACAAGTAAATGAATT 91888 >seq912 Length=64277 Score = 96.9 bits (106), Expect = 2e-16 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 1897 TGACGAATACCATATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCG 1956 |||| | || |||| ||||||||||||||||||||||||| |||||||| | |||||| Sbjct 265 TGACAAGCACAATATGAAAGTTGTAGTTGATATAATTTAGCATGTCATATTCGAAATGCT 324 Query 1957 GCGATTTGATTGGTAAATAATTTGCCTGGTATGAAA 1992 || |||||| | ||||||||| | || ||| | ||| Sbjct 325 GCAATTTGAATTGTAAATAATATTCCGGGTGTAAAA 360 >seq690 Length=132870 Score = 91.5 bits (100), Expect = 6e-15 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1897 TGACGAATACCATATAAAAGTTGTAGTTGATATAATTTAGCGTGTCATATACAAAATGCG 1956 |||| | || |||| ||||||||||||||||||| ||||| |||||||| | ||||||| Sbjct 111728 TGACAAGCACAATATGAAAGTTGTAGTTGATATAACTTAGCATGTCATATTCGAAATGCG 111669 Query 1957 GCGATTTGATTGGTAAATAATTTGCCTGGT 1986 || |||||| | || |||||| | || ||| Sbjct 111668 GCAATTTGAATTGTTAATAATATTCCAGGT 111639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21724214652420