Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_001270.2
Length=6825
Score E
Sequences producing significant alignments: (Bits) Value
seq3817 199 2e-47
seq67372 149 3e-32
seq127736 145 3e-31
seq84780 127 9e-26
seq150107 87.8 8e-14
>seq3817
Length=4434
Score = 199 bits (220), Expect = 2e-47
Identities = 292/408 (72%), Gaps = 5/408 (1%)
Strand=Plus/Plus
Query 2567 TGGTAATTATGTTAAAAATATTGTTTTACCACT-AGAATTAGTtaataataatcctcgta 2625
|||| ||||||||||||||| ||||||| | || || | | |||||| ||||
Sbjct 1532 TGGTGCTTATGTTAAAAATATAATTTTACCTATGAGCGCTATATTA-AATAATAAACGTA 1590
Query 2626 ataaaatgggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTC 2685
|| || | || |||||||| || | ||||||||||| || |||||| |||||
Sbjct 1591 ATGAAGTTGGTATTAAAAATTTAGGTATTAATGATAAAAAGTTACTTAATAGTACTATTC 1650
Query 2686 GCTCGCAAGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAA 2745
| | || || | || | ||||||| | | ||||||| |||| ||| |||||
Sbjct 1651 GTACTAAAACAAGATTAATACATAAAGCATTTCATAATTTTTATAATTCAAAAGTTTTAA 1710
Query 2746 GTTTTTTGACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATT 2805
||||| | |||||||||||||| | ||| ||||||| |||| ||| ||| |||||
Sbjct 1711 GTTTTGTTACTTTAACTTATGCAGATAACATGAAAGATATTAATAAAGCAAAACATGATA 1770
Query 2806 TAAAGTTATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATC 2865
| |||| ||||| | |||| ||||||||||| | |||| ||| ||||| ||
Sbjct 1771 TTGCTATATTCTTTAAACGTTTAAAGCGTTGATGAAATGACCCTAAACGTGCTAAATAT- 1829
Query 2866 ATAAAGGAATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACT 2925
|| ||| ||||||||||||||| ||| || ||||||||||| || || |||| |
Sbjct 1830 TTAGGTGAA--TTAAAATATATGTATGTTTACGAATATCAAAAACGTGGTGCTATTCATT 1887
Query 2926 TTCATATCATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAAT 2973
||||||| |||| ||| |||||||| ||| ||| | ||| |||||
Sbjct 1888 TTCATATACTATTTAACAGAAAAATACATAAGAGTATGTTACCACAAT 1935
>seq67372
Length=4824
Score = 149 bits (164), Expect = 3e-32
Identities = 289/422 (68%), Gaps = 11/422 (3%)
Strand=Plus/Minus
Query 2573 TTATGTTAAAAATATTGTTTTACC-ACTAGAATTAGTtaataataatcctcgtaataaaa 2631
|||| ||||||||||||||||||| | | |||| || || |||| | | |||||||
Sbjct 916 TTATTTTAAAAATATTGTTTTACCTATTTCAATT--TTGAT--TAATATTGGGAATAAAA 861
Query 2632 tgggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCGCTCGC 2691
|| |||| | || ||| | |||||||| | |||||| | |||| |
Sbjct 860 AAGG---TAAATGTTATGTTGGTAATAAGCAAAAATTGAGAAATAGTACTGTTCGTACTA 804
Query 2692 AAGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTT 2751
|| |||| |||| ||||||| | ||||||| ||| |||||| |||||||||
Sbjct 803 AAACTAATTTAATTCAAAAAGCATTACATAATTTTTATAATAGTAAAATGTTAAGTTTTG 744
Query 2752 TGACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGT 2811
| |||||||||||| | |||| | |||||||||||||| ||||| ||| | |
Sbjct 743 TTACTTTAACTTATAAAGATAATATGCAAGATGTTAAAAAAGCAAAAAAAGATATTGGTT 684
Query 2812 TATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAG 2871
|||||||| ||| || | |||||||| | |||| |||| | || || ||
Sbjct 683 TATTTTTTGTTAAATTACAAAAGTGATGAAATGACCCTAAACGTTTT---CATTATTTAG 627
Query 2872 GAATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATA 2931
|| ||||||||| | ||| ||||||||||||| || || || | || |||||||
Sbjct 626 GAGAATTAAAATATTTTTATGTTTATGAGTATCAATCTCGTGGCGCTATACATTTTCATA 567
Query 2932 TCATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAATACTGAAAACACGGTATTA 2991
| || || || ||| |||| ||| ||| | || | ||| |||| || ||| |||
Sbjct 566 TAATTTTTAATAGAAAGATACATAAAAGTATGTTAGCAGAATGATGAAGTCATGGTTTTA 507
Query 2992 AT 2993
||
Sbjct 506 AT 505
>seq127736
Length=5091
Score = 145 bits (160), Expect = 3e-31
Identities = 263/381 (69%), Gaps = 9/381 (2%)
Strand=Plus/Minus
Query 2573 TTATGTTAAAAATATTGTTTTACCACTAGAATTAGTtaataataatcctcgtaataaaat 2632
||||||||||||| || ||||||| || | || | | || ||| | |||||| |
Sbjct 1861 TTATGTTAAAAATGTTATTTTACC--TATTAATA-TGATTAGAAATGAAAGAAATAAATT 1805
Query 2633 gggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCGCTCGCA 2692
|| | || |||| ||| || ||||| || || | |||| | | |||| | |
Sbjct 1804 AGGTATAAAGAATATTGGTAA---TGATACTAAGTTAAGAAATAATAATGTTCGTACTAA 1748
Query 2693 AGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTT 2752
| | || | ||| ||||||| | ||||||| ||| | || ||||| ||||||
Sbjct 1747 ATGTAAATTAGTTCAAAAAGCATTACATAATTTTTATAATGCAAGAATTTTAAATTTTTT 1688
Query 2753 GACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTT 2812
|||||||||||| ||||| | ||| |||||||| || |||||||| | ||
Sbjct 1687 AACTTTAACTTATCATAAAAATGAAACTGATATTAAAAAAGCAAAGCATGATTTACAATT 1628
Query 2813 ATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGG 2872
||||||| | | |||| ||||||||||| | |||| ||||||||| ||| |||
Sbjct 1627 ATTTTTTTAACGTTTAAAACGTTGATGAAATGACCCTAAACGTTCTAAA---CATTTAGG 1571
Query 2873 AATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATAT 2932
|||| |||| | ||| |||||| |||||||| || || |||||| | ||||| ||
Sbjct 1570 TGAATTAAGATATTTTTATGTTTATGAATATCAAAAGCGTGGTGCAGTTTATTTTCACAT 1511
Query 2933 CATATTAAACCAAAAAATACC 2953
|||| || | ||||||||
Sbjct 1510 ATTATTTAATCGTAAAATACC 1490
>seq84780
Length=1123
Score = 127 bits (140), Expect = 9e-26
Identities = 282/421 (67%), Gaps = 9/421 (2%)
Strand=Plus/Plus
Query 2573 TTATGTTAAAAATATTGTTTTACCACTAGAATTAGTtaataataatcctcgtaataaaat 2632
||||||||||||| | |||||||| | || | ||||||| | | |||||||
Sbjct 452 TTATGTTAAAAATGTAGTTTTACCTATTTCTTTTTTAAATAATATTG---GAAATAAAAA 508
Query 2633 gggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCGCTCGCA 2692
|| |||| | || ||| | ||||||| | |||| | | |||| | |
Sbjct 509 AGG---TAAATGTTATGTTGGTAATAAACAAAAATTAAGAAATAATACTGTTCGTACTAA 565
Query 2693 AGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTT 2752
| |||| |||| ||||||| | ||||||| || |||||| ||||||||| |
Sbjct 566 AACTAATTTAATTCAAAAAGCATTACATAATTTTTATGATAGTAAAATGTTAAGTTTTGT 625
Query 2753 GACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTT 2812
|||||||||||| | |||| | ||||| |||||||| ||||| ||| | ||
Sbjct 626 TACTTTAACTTATAAAGATAATATGCAAGATATTAAAAAAGCAAAAAAAGATATTCGTTT 685
Query 2813 ATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGG 2872
||||||| ||| |||| |||||||| | |||| |||| | || ||| |||
Sbjct 686 ATTTTTTCTTAAATTAAAGAAATGATGAAATGACCCTAAACGTTTTGAA---CATTTAGG 742
Query 2873 AATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATAT 2932
| ||||||||| | ||| |||||| |||||| || || || |||| ||||||||
Sbjct 743 AGAATTAAAATATTTTTATGTTTATGAATATCAAGTGCGTGGTGCTATTCATTTTCATAT 802
Query 2933 CATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAATACTGAAAACACGGTATTAA 2992
|| || || ||| |||| || ||| | || | ||| |||| || ||| ||||
Sbjct 803 AATTTTTAATAGAAAGATACACAAAAGTATGTTAGCAGAATGATGAACTCATGGTTTTAA 862
Query 2993 T 2993
|
Sbjct 863 T 863
>seq150107
Length=415
Score = 87.8 bits (96), Expect = 8e-14
Identities = 188/276 (68%), Gaps = 9/276 (3%)
Strand=Plus/Plus
Query 2567 TGGTAATTATGTTAAAAATATTGTTTTACCACTAGAATTAGTtaataataatcctcgtaa 2626
||||||||||||||||||| |||||||||| | ||| ||| | ||| | ||
Sbjct 146 TGGTAATTATGTTAAAAATGTTGTTTTACCTATGTCGTTAATTATTGGAAATAAAAGAAA 205
Query 2627 taaaatgggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCG 2686
| ||| || | ||||||| ||| || | | |||| || | |||| | ||||||
Sbjct 206 TGAAAAAGGTATAAAAAATATTGGTAATATTACTAAA---TTACGAAATAATACTATTCG 262
Query 2687 CTCGCAAGGAAA--TTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTA 2744
| ||| || || |||| ||| ||| | | |||||| | | | |||| | |
Sbjct 263 TAC--AAGAAATGCTTTAATTCATAAAACATTTCATAATTTTAGTAGTGCTAAATGTCTT 320
Query 2745 AGTTTTTTGACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAA-ATGA 2803
||||| |||||||||||| | ||||| | ||| ||||| || | |||| ||||
Sbjct 321 TCATTTTTAACTTTAACTTATAAAGATAATGTTACTGAT-TTAAATAAAGCAAAACATGA 379
Query 2804 TTTAAAGTTATTTTTTAATAATATAAATCGTTGATG 2839
|||| | || |||||||| | |||| ||||||||
Sbjct 380 TTTACAATTGTTTTTTAAACGTTTAAAGCGTTGATG 415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 21685674830064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |