Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq1034 1815 0.0 >seq1034 Length=5365 Score = 1815 bits (2012), Expect = 0.0 Identities = 2458/3395 (72%), Gaps = 127/3395 (4%) Strand=Plus/Minus Query 659 AAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCACCATGAAATCCCGCCGT 718 || |||| ||| |||||||| || | | | || |||| ||||| |||||||| || | Sbjct 5239 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 5180 Query 719 GGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCACACTGATGGCTGGTAT 778 |||||| | ||||| | ||||||||||| ||||| || || ||||||| |||| | Sbjct 5179 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 5120 Query 779 GTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGGACTTCTATGCTAACCC 837 | || || || |||||||| || ||||| || || |||| ||| || |||| ||| || Sbjct 5119 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGGCGTTTTATGATAATCC 5061 Query 838 CAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTCTCACTGCCGAGGGTCG 897 ||||||| | ||||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct 5060 CAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG 5001 Query 898 TTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTGTGCCTGAGTATGGCAC 957 || |||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct 5000 CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC 4941 Query 958 CCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCGCACACTTCCTTTGGGT 1015 ||| |||||||| | || || || || ||||| ||||||| ||||||||| ||| Sbjct 4940 --AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGT 4883 Query 1016 TCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAA 1075 | |||||||| |||||| | ||| || | | || || |||||||||||||| Sbjct 4882 AGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAA 4823 Query 1076 AACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTATTCTCAGGATGCTTTC 1135 || || ||||||||||||||| ||||||||||||||| || || | ||||| ||||| Sbjct 4822 AATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTT 4763 Query 1136 TCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACCCCTTAAATCCACCTCG 1195 || || |||| ||| | |||||||| ||| | || ||||| || |||||| | ||| Sbjct 4762 TCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGT 4703 Query 1196 TATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAAATCTGATGTTGACATA 1255 ||||||||||| || ||||| || |||||||||||||| ||||| || ||| | ||| | Sbjct 4702 TATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTT 4643 Query 1256 GCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAAAACGCAGATGGCTCTT 1315 || || ||||| |||| | || |||||||| || ||||||| || || | || Sbjct 4642 GCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA 4583 Query 1316 TTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGGGATGAAACTACTCCCA 1375 | || ||||| || || |||| |||||||||||||||||||||||||| | ||| || Sbjct 4582 CTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACA 4523 Query 1376 ATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGTGGGTTACGACGTGACC 1435 ||||| | ||| || ||||||| ||||||||||| ||| | |||||||||||| ||| Sbjct 4522 ATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACG 4463 Query 1436 CCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAG 1495 ||||||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 4462 CCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAA 4403 Query 1496 CAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATG 1555 |||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||| Sbjct 4402 GTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATG 4343 Query 1556 CGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTTTATCGCTTCAATGACG 1615 ||| || || || || || | |||| ||| ||||||||||||||||| |||||| Sbjct 4342 CGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACG 4283 Query 1616 CAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTACGTTACTAATGCAGGA 1675 ||||| ||| || | |||||||||||||||| | ||||| || || ||| |||||| Sbjct 4282 CAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGA 4223 Query 1676 ATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAACT 1735 ||| || |||| |||||| |||||||||||||||||||||| ||||||||| || | Sbjct 4222 ATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAAT 4163 Query 1736 TCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACCTTTCGCCATCATCTCA 1795 || | || ||| | |||||| |||||||| || |||||||||||||| || | Sbjct 4162 TCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-A 4104 Query 1796 ACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCTCAATATGATGGGCGCT 1854 ||| | | |||| ||||||||| | ||||| || || ||||| |||||| | ||| | Sbjct 4103 ACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACG 4044 Query 1855 CTTCTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGGCAAAGAATCAATGCTT 1914 | | ||||||||||| | ||||| |||||| || ||||| | ||| || | || Sbjct 4043 TTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTT 3984 Query 1915 GACATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG--GCTTAAC--TTACAA 1970 |||||| |||| || ||||| || ||| | | | ||| | | ||| || | Sbjct 3983 GACATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGCTGTTCAACCACTAATA 3927 Query 1971 AGGAATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTTCAAACCGCTATTGCCT 2027 | || || |||| ||| | ||| | | ||| || || |||||| | |||| Sbjct 3926 GGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCT 3867 Query 2028 CCATCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAGGACGATTTCGAATTCT 2087 | || || || |||||||| ||| | ||| | || | || || || |||||||| || Sbjct 3866 CTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTC 3807 Query 2088 TAACTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGG 2147 | || || || || |||||||| ||||||||||| |||||||| ||| |||||| Sbjct 3806 TGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGG 3747 Query 2148 CTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTATTGAGT 2207 ||||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 3746 CTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGT 3687 Query 2208 TTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATTCAAACGGCATGTCTTA 2267 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct 3686 TTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCA 3627 Query 2268 TTATGGAAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTCGATGCCCCGGTTAAAG 2327 | ||||||||||||||||| || |||||||| |||||||| ||||| |||||||||| Sbjct 3626 TCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAG 3567 Query 2328 CCGCTGAACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAACACTGAGCTTATTACTT 2387 |||||||| | |||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct 3566 CCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTG 3507 Query 2388 ACGCAGAAAACAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTGATG-GATGTC------ 2440 |||||||| | || | |||| ||||| | || || ||||||||||| ||||| Sbjct 3506 ACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGG 3447 Query 2441 TAAAAAATCTATTCGC---CGCTCTGGT---------------------------GGCAA 2470 ||||||| | | || ||| ||||| ||||| Sbjct 3446 TAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAA 3387 Query 2471 ATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTCTAAGGGGCTT 2530 |||||| ||||| || |||||||| || || |||||| |||| | |||||||| Sbjct 3386 GCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGC--AGGGGCTT 3329 Query 2531 CGGCCCCTCTATTTAAGGATACAAAATGTCTAACGTACAAACTTCCGCTGAACGTATTCC 2590 |||||||| || || |||||| | |||||||| | |||||| ||| || ||||| || Sbjct 3328 CGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCC 3270 Query 2591 GCATGACCTCTCACATCTGGTATTCGAAGCTGGTAAAATCGGACGCCTTAAAACTATCTC 2650 ||||||||| || ||||| | ||| |||||| | || || || |||| || || || Sbjct 3269 GCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTC 3210 Query 2651 CTGGACTCCTGTTGTCGCTGGTGATTCTTACGAAACTGAAATGGTAGGCGCTATTCGTCT 2710 ||||| ||| ||||||| || || | ||| | || || |||||| | ||||| Sbjct 3209 AACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCT 3150 Query 2711 TTCTCCTCTCCGTCGTGGTCTGGCTGTCGACTCTCGCGTCGACGTCTTTACTTTCTATAT 2770 |||||| | |||||||| || ||| | |||||| || ||| | |||||||| ||| | Sbjct 3149 TTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGT 3090 Query 2771 CCCTCATCGTCATGTCTATGGTCAACAATGGATTGACTTTATGAAGACTGGCGTTAACGC 2830 |||||||||||| || |||||| |||| |||||| | || |||||| ||| ||||| || Sbjct 3089 CCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGC 3030 Query 2831 TACTCCTCTGGC-TCCGGTAACTTGTTCCTCTGGCT---GGGATTCTGCTGCCTATCTTG 2886 |||||||| | | | |||| | |||| | || ||| || | ||||| Sbjct 3029 CACTCCTCTCCCGACTGTTAAC----ACTACTGGTTATATTGACCATGCCGCTTTTCTTG 2974 Query 2887 GCAC---TATCCCGTCAACTAATTTGAAGGTTCCTAA--ATTCCTTCATCAATCTTATCT 2941 |||| || ||| || ||| || | ||||| ||| || ||| |||| | Sbjct 2973 GCACGATTAACCCTGATACCAAT---AAAATCCCTAAGCATTTGTT--TCAGGGTTATTT 2919 Query 2942 CAATATTTACAACAACTACTTTAAGCCGCCGTGGTCTAATGACCTCACCTATGCTAACCC 3001 ||||| || |||||||| ||||| |||||||| ||||| ||| | ||||||| Sbjct 2918 GAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACC- 2860 Query 3002 ATCTAATATGCCCGCTGAGGAT--TACAAATGGGGCGTTC--GTGTCGCTAACTTAAAAT 3057 ||||| || | | ||| | | | | ||| || || | || |||| Sbjct 2859 --CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAA 2802 Query 3058 CTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAAC-TAAGCAGGATATGACTACTGGC 3116 | || ||||| || || ||||||||||| | | | | | | | ||||| ||| Sbjct 2801 C-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGCTTTCTCGCCAAATGACGACT--- 2747 Query 3117 GCTACCA---CTATCGATATTATGGGCCTACAAGCTGCCTATGCTAAACTCCACACTGAA 3173 |||||| |||| || |||||||| || |||||||| |||||||| | || ||||| Sbjct 2746 TCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGAC 2687 Query 3174 CAGGAACGTGACTATTTCATGACTCGCTACCGCGATATTATGAAAGACTTTGGCGGTCAC 3233 || |||||||| || |||||| || |||| ||| |||| ||||| ||| | Sbjct 2686 CAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAA 2627 Query 3234 ACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGATGCGCTCTGAATTTTGGGCCTCT 3293 ||||| || |||| ||| ||||||||| | || | ||||||||| | | ||||| ||| Sbjct 2626 ACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCT 2567 Query 3294 GGCTATGACGTCGACGGTACTGACCAAACTTCATTGGGTCAGTTCTCTGGTCGCGTCCAA 3353 |||||||| || || || ||||||||||| || || || ||||| |||||||| || ||| Sbjct 2566 GGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAA 2507 Query 3354 CAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTCCTGAGCATGGCGTAATTATGACT 3413 || |||| ||| ||| ||||| || |||| |||||||||||||||| || | ||| Sbjct 2506 CAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACT 2447 Query 3414 TTATCTGTTACTCGCTTCCCTCCTACT--CACGAAATGGAAATGCACTATCTCGTCGGTA 3471 | | || ||| || || |||||| || ||| || || || || || || || Sbjct 2446 CTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTA 2389 Query 3472 AGGAATCTCTGACTTATACTGACATTGCCTGTGACCCTGCTCT-TATGGCTAACCTGCCT 3530 | | || |||||||||| || ||||| | ||||||| | | |||||| ||| |||| Sbjct 2388 AAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCG 2330 Query 3531 CCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTGCTGGT---ACTGGTAAATTCAAA 3587 |||||||||||| | || || | || | |||| || | || || || || Sbjct 2329 CCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAG 2270 Query 3588 ATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACCGCGTTGCCTTCC--CTTATAACG 3645 ||||| || ||||| ||||||||| | |||| ||| | ||| ||||| || Sbjct 2269 ATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTC--TCCTGCTTATCACC 2212 Query 3646 CTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGTCTAATGATATTCTCGAACGTGTA 3704 |||||| |||||||| ||| |||| |||| ||| ||| |||| | | ||||| ||| Sbjct 2211 TTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTA 2153 Query 3705 CTTGTTCGAACTGATAACTATGATGAAATCTTCCAGTCTATGCAACTTGCACACTGGAAC 3764 ||| |||| || | ||||| | |||||||| | || | || ||||| Sbjct 2152 CTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAAT 2093 Query 3765 ATGCAAACTAAATTTAACACTACTGTATATCGTCATATGCCTACCACTCGTGATGGCATC 3824 | || ||||||||| || || ||||| || |||| |||||||| ||| ||| Sbjct 2092 AGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATC 2033 Query 3825 ATGA---CGTCATAAAA---------------CAAAACGTTGAACGGGTACAAATTTTAA 3866 |||| ||| |||||| | |||| ||| |||| ||||||||| Sbjct 2032 ATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAATTTTAA 1973 Query 3867 TTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTTAGCTAACTTACTTAAGGAAATT- 3925 ||| |||| | |||||| ||||||||||||| ||| | | ||| |||| || Sbjct 1972 TTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGCTT-AGGAGTTTA 1914 Query 3926 CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960 |||||||||| |||| | | ||| |||||||| Sbjct 1913 ATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 1879 Score = 179 bits (198), Expect = 1e-41 Identities = 658/1047 (63%), Gaps = 71/1047 (7%) Strand=Plus/Minus Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504 ||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || || Sbjct 1400 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 1343 Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564 |||| |||||||| | || ||| || || |||||| || || Sbjct 1342 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 1283 Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618 |||| |||||||| |||| || ||||| || ||||| |||| || |||| | Sbjct 1282 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 1229 Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678 ||||||||| ||||| || ||||| || |||||| ||| || | | | || | || Sbjct 1228 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 1169 Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734 | | | | || || | | | || | |||| |||| || | | | | | | || Sbjct 1168 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 1109 Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783 ||||| || | |||| |||| | | || | ||||| | ||| Sbjct 1108 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 1049 Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 1048 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 989 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 988 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 929 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 928 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 869 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 868 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 809 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 808 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 749 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 748 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 689 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 688 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 629 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263 |||| | ||||| ||||| | ||||| |||| |||| | || | Sbjct 628 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 582 Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323 | | | |||| | | || || | || || || Sbjct 581 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 551 Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383 | || || || |||||| | || |||||| | | ||| || |||||||| | || Sbjct 550 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 491 Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443 |||| ||||| ||| ||||||||||||| || |||||||||||||||| | ||||| Sbjct 490 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 431 Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470 || ||| | ||||| || |||| || Sbjct 430 CGGTAAAGCTGATGGTATTGGCTCTAA 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17412658374060