Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_014929.1 Length=1703 Score E Sequences producing significant alignments: (Bits) Value seq49779 104 2e-19 >seq49779 Length=5410 Score = 104 bits (114), Expect = 2e-19 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 580 GGACTCTGGTGGGACGGTTATCATCAACAAGAAAATGTCATCATAGACGATTTCTACGGA 639 |||| ||||||||||| || |||| ||||| |||||||| ||||||||||||||| Sbjct 4988 GGACCATGGTGGGACGGCTACGATCAGGAAGAAGCCGTCATCATTGACGATTTCTACGGA 5047 Query 640 TGGATAAAGTACGACGAACTCCTCAAAATAACTGACCGCTACCCATATAAAGTACAAATC 699 |||||||| || || || | | |||||| |||| | || ||| |||| |||| | Sbjct 5048 TGGATAAAATATGATGAGTTATTAAAAATATGTGACAGATATCCACATAAGGTACCGGTT 5107 Query 700 AAAGGAGGATTTGAGGAGTT 719 ||||| |||||||| || || Sbjct 5108 AAAGGTGGATTTGAAGAATT 5127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5332830081046