Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_020206.1 Length=1719 Score E Sequences producing significant alignments: (Bits) Value seq49779 118 1e-23 >seq49779 Length=5410 Score = 118 bits (130), Expect = 1e-23 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 985 AAATTCCTCGTATCCCCCTTTTACTGGTACTTTGTATGGGTATCGGTCGCATATTTTTAG 1044 |||||| || |||| ||||| || ||||| || | ||| |||| ||| |||||||||| Sbjct 5128 AAATTCTTCAAATCCACCTTTAACCGGTACCTTATGTGGATATCTGTCACATATTTTTAA 5069 Query 1045 TAGTTCGTCCCATTTTATCCATCCGTAGAAGTCGTCTATTATGACGTTGTCTTGTTGGTG 1104 || || || ||||||||||||||||||| ||||| || |||||| |||| || | Sbjct 5068 TAACTCATCATATTTTATCCATCCGTAGAAATCGTCAATGATGACGGCTTCTTCCTGATC 5009 Query 1105 GTATCCGTCCCACCATTCTCCGCGTGGTTTGTAGTATATTCCTCC 1149 ||| |||||||||||| ||| | || || || || | || ||| Sbjct 5008 GTAGCCGTCCCACCATGGTCCTCTCGGCTTATAATAGACTCGTCC 4964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5383953676790