Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_021707.2 Length=1855 Score E Sequences producing significant alignments: (Bits) Value seq49779 77.0 4e-11 >seq49779 Length=5410 Score = 77.0 bits (84), Expect = 4e-11 Identities = 111/154 (72%), Gaps = 6/154 (4%) Strand=Plus/Plus Query 781 CTACTACAAGCCGCGTGGAGAATGGTGGGATGGATACA--CCGGAC-AACCGTGCGTTGT 837 ||| || |||||| | ||| ||||||||| || ||| | ||| || | ||| | Sbjct 4972 CTATTATAAGCCGAGAGGACCATGGTGGGACGGCTACGATCAGGAAGAAGC---CGTCAT 5028 Query 838 TATCGATGACTTCTACGGATGGATCAAATACGATGAGCTTCTCAAGATCTGCGACAGATA 897 || || || |||||||||||||| ||||| |||||| | | || || || |||||||| Sbjct 5029 CATTGACGATTTCTACGGATGGATAAAATATGATGAGTTATTAAAAATATGTGACAGATA 5088 Query 898 TCCTTACAGAGTCCCTGTCAAAGGAGGATATGAA 931 ||| | | || || || ||||| |||| |||| Sbjct 5089 TCCACATAAGGTACCGGTTAAAGGTGGATTTGAA 5122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5818504240614