Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_004285.1 Length=4176 Score E Sequences producing significant alignments: (Bits) Value seq1071 111 4e-21 >seq1071 Length=803674 Score = 111 bits (122), Expect = 4e-21 Identities = 165/229 (72%), Gaps = 9/229 (4%) Strand=Plus/Minus Query 1376 GCAGGAAATGCAGAAGCGACTATCACTTTTTCCAAAGTTAAATTTCTCAGGAACTACATT 1435 ||||||| ||||||| ||| |||| ||| ||||| ||||| ||||| | ||||| ||| Sbjct 175518 GCAGGAAGTGCAGAAAGCACTCTCACATTTACCAAAATTAAACTTCTCCGAAACTATATT 175459 Query 1436 CTCTATTGCATCCGTTACGGTATCGAAACAGTCAATATCTATGGAAATAAAATCCAACAA 1495 |||||||||||| | |||||||||| | ||| |||||| || || |||| | |||||| Sbjct 175458 CTCTATTGCATCTGCTACGGTATCGGATCAGCACATATCTTTGTAACTAAAGT-CAACAA 175400 Query 1496 -CAATTAACTGAAGCAATGGATACGTTTAAAGTACTATTTGAAAATAGAGATCCAAACGA 1554 || ||| |||| | || || || ||| | ||| || ||| ||||||| || Sbjct 175399 GGAACTAAAAGAAG--TTAGAGAC-TTCAAA----TGTTTCAAGATAAAGATCCAGACCT 175347 Query 1555 CGTAATATTAGATGCAGGGTGCAAACTGTATCATGAAGaaaaaaaaGAA 1603 || ||| ||| | | || ||| ||| |||||||| |||||| Sbjct 175346 AGTGATAGAAGAAGGAAAATGTGAACATTATACAGAAGAAAAGAAAGAA 175298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13249726590790