Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_013116.1 Length=2166 Score E Sequences producing significant alignments: (Bits) Value seq3407 87.8 2e-14 >seq3407 Length=1101 Score = 87.8 bits (96), Expect = 2e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 1844 TCCATCTTTGATCGCGTAGTCATACCCCTTCTCCGGAGTCCCTCGAGACTTTGTAATGTT 1903 |||||| ||||| ||||| || || || |||||| | ||||| || | || ||| Sbjct 577 TCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTTCCTCGTGATGGTACAACGTT 636 Query 1904 TGGGTGGTGACCATCGACATCGAATACATCAGCCTTTCTACTGCGAAACTTCCGTCCGAA 1963 |||||||| || || ||||| || | ||| || | || | |||||| ||||| Sbjct 637 CGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGAA 696 Query 1964 CTCTGCA--AAGCAGTGTAGGTGAGTGCCTCCATCCTCGTGATGCTCTCTTCCAATGATG 2021 || ||| ||||| || || ||||| |||||| | |||| ||||| ||||||||| Sbjct 697 ATC-GCAGAAAGCA-TGGAGATGAGTACCTCCAGCAGAATGATCCTCTCGCCCAATGATG 754 Query 2022 CACTCAGCTCCCAG 2035 ||||| | |||||| Sbjct 755 CACTCTGATCCCAG 768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6821486723688