Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_023844.1 Length=2220 Score E Sequences producing significant alignments: (Bits) Value seq3407 123 3e-25 >seq3407 Length=1101 Score = 123 bits (136), Expect = 3e-25 Identities = 181/252 (72%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 1906 CCATCCTTGATCGCATAGTCGTAACCTC--TCCATGGAGTTCCCCAAGAAGGCTCGATGT 1963 ||||||||||| || || |||||||| | ||| ||| |||| | || || | | || Sbjct 578 CCATCCTTGATTGCGTAATCGTAACCACGTTCC--GGACTTCCTCGTGATGGTACAACGT 635 Query 1964 TTGGGTGACGACCGTCGACATCAAAGATATCAGTTCGTCGGCTTCGGAACTTCCGTCCGA 2023 | ||||| | ||||| |||||||||||||| | ||| ||||| | ||||||| |||| Sbjct 636 TCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGA 695 Query 2024 AATCGATGAAGCAATGGAGATGAACACCTCCATCCTGGTGAATTTCTCGGGCGATGATGC 2083 ||||| ||| |||||||||| ||||||| | ||| ||||| | ||||||| Sbjct 696 AATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAATGATCCTCTCGCCCAATGATGC 755 Query 2084 ACTCAGCTCCCAATCCAGAAAAGTGGTCCATAACCCGGA--ATCCATCGAGGGCATCGCA 2141 |||| | ||||| | ||| | |||| | | |||| || |||| || || |||| Sbjct 756 ACTCTGATCCCAGTGTAGAGAGATGGT--TTGAAACGGACCATTCATCAAGTTCACCGCA 813 Query 2142 CTGGGCATACGT 2153 ||| ||||| || Sbjct 814 CTGCGCATATGT 825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6994263591924