Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_023871.1 Length=2236 Score E Sequences producing significant alignments: (Bits) Value seq3407 111 2e-21 >seq3407 Length=1101 Score = 111 bits (122), Expect = 2e-21 Identities = 175/245 (71%), Gaps = 7/245 (3%) Strand=Plus/Plus Query 1872 CAGCTCGGCTCTTTCCGATTGGCCGTTCGAGGCCTCCAGCGACAACGTCTCCATCCTTGA 1931 ||||||| | || || |||||||| |||| ||||| ||||||| || ||||||||||| Sbjct 531 CAGCTCGACACT---CGCTTGGCCGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGA 587 Query 1932 TTGCGTAGTCGTAACCCTTCTCTGGTGTTCC-CGTAGAAGGCTGGATGTTCGGGTGACAA 1990 ||||||| |||||||| || || |||| ||| || || | ||||||||| Sbjct 588 TTGCGTAATCGTAACCACGTTCCGGACTTCCTCGT-GATGGTACAACGTTCGGGTGGTGG 646 Query 1991 CCGTCCACATCGAATATGTCAGTCTTTCGACTGCGAAACTTCCGTCCGAAGTCTGCG-AA 2049 ||||| ||||| || || || | || || | |||||| ||||| || | || Sbjct 647 CCGTCAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAA 706 Query 2050 GCAGTGTAGGTGAAGTCCTCCATCCTCGTGATGCTCTCTTCCAACGATGCACTCAGCTCC 2109 ||| || || ||| |||||| | |||| ||||| |||| ||||||||| | ||| Sbjct 707 GCA-TGGAGATGAGTACCTCCAGCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCC 765 Query 2110 CAGTG 2114 ||||| Sbjct 766 CAGTG 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7045456738068