Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005041.2 Length=5335 Score E Sequences producing significant alignments: (Bits) Value seq27214 196 2e-46 >seq27214 Length=1010 Score = 196 bits (216), Expect = 2e-46 Identities = 210/278 (76%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 2215 ATCAGGATTGCCATAATAGAAGGATTATTATATGGAATGAACCTAATTATGAACCAAGGG 2274 |||| ||||| ||||||||||| |||||||| ||||||||||| || |||||||| || | Sbjct 1010 ATCAAGATTGTCATAATAGAAGAATTATTATTTGGAATGAACCGAACTATGAACCTAGAG 951 Query 2275 AAATGGAGAACTTAAAAATGCTGTTTGCTGGTGATAATTTGTCTGCCAATGTAAAATGTA 2334 ||| ||| ||||| || ||||| ||||| |||||||||||||| || ||||||||||||| Sbjct 950 AAACGGAAAACTTGAAGATGCTTTTTGCGGGTGATAATTTGTCAGCTAATGTAAAATGTA 891 Query 2335 AGCCTCAGGCAAATGTAAAACGAACACCTGTTATTGTGTTGACCAATTCACTGCCAAATT 2394 |||| || |||||||||||||| || || ||||||| | | ||| | || ||| Sbjct 890 AGCCACAAGCAAATGTAAAACGTACTCCAATTATTGTACTTAGTAATCATCGTCCTCATT 831 Query 2395 TTTGTCAACAAACAGCATTTAATGATCGTGTAATAACGTATCATTGGACTCAGGCTACAT 2454 || | | || | |||||| || | || || ||| |||||| | || | | Sbjct 830 TTGCTAATCACAATGCATTTGCAGACAGAGTTATGCAGTACAATTGGAATTCCGCACCTT 771 Query 2455 TTTTGAAGGACTACAATAAAAAGCCGAGACCAGATGCT 2492 |||| ||||| || |||| || || ||||| |||||| Sbjct 770 TTTTAAAGGATTATGATAAGAAACCAAGACCTGATGCT 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16953172858000