Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_005341.1 Length=6034 Score E Sequences producing significant alignments: (Bits) Value seq27214 82.4 3e-12 >seq27214 Length=1010 Score = 82.4 bits (90), Expect = 3e-12 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 2806 GCACATGTAAAACGCACTCCAGTTATTATACTAACTAATAATACAGTACCTTTTATGTAT 2865 ||| |||||||||| |||||| ||||| |||| | |||| || | |||| || Sbjct 882 GCAAATGTAAAACGTACTCCAATTATTGTACTTAGTAATCATCGTCCTCATTTTGCTAAT 823 Query 2866 GAAACTGCTTTTGCTGATAGAATTATTCAGTATAAATGGAATGCTGCGCCATTCCTAAAG 2925 | | ||| ||||| || ||| |||| ||||| || |||||| | || || || ||||| Sbjct 822 CACAATGCATTTGCAGACAGAGTTATGCAGTACAATTGGAATTCCGCACCTTTTTTAAAG 763 Query 2926 GATTATGAATTGAAACCA 2943 |||||||| ||||||| Sbjct 762 GATTATGATAAGAAACCA 745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19185652985888