Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptinotarsa_20decemlineata_20[genbank_20GCA_5F000500325.1_202013- 12-02] 24,393 sequences; 1,170,241,964 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq23633 545 8e-152 >seq23633 Length=1016 Score = 545 bits (604), Expect = 8e-152 Identities = 577/758 (76%), Gaps = 4/758 (1%) Strand=Plus/Minus Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712 || |||||||||||||| || || | | | || |||| ||||| |||||||| |||||| Sbjct 763 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 704 Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772 |||||| | | || | | |||||||| ||||| || || |||| || |||| Sbjct 703 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 644 Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832 | || || || ||||| || | || || ||||| | ||| || |||||||||||| Sbjct 643 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 584 Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892 |||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 583 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 524 Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952 | |||||||| | ||||||||||||||||||||||||||||||||||| || Sbjct 523 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC- 465 Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010 ||| | |||||| | ||||| || || |||||| ||||||| ||||||||| ||| Sbjct 464 -AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 406 Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070 | |||||||| ||||| | ||| || | | || || ||||||||||||||| Sbjct 405 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 346 Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130 |||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| |||| Sbjct 345 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 286 Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190 | || |||| ||| | ||||| |||||| | || || || || |||||||||||| | Sbjct 285 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 226 Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250 |||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | | Sbjct 225 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 166 Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310 | ||||||||||||| ||||||||||||||| ||||| |||||||| | || | Sbjct 165 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 106 Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370 | |||||||| | || | ||||| ||| ||||||||||| ||||| ||| ||||| Sbjct 105 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 46 Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACC 1408 ||| | || || |||| |||||||||| ||| Sbjct 45 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17438546181495