Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_003793.1 Length=7768 Score E Sequences producing significant alignments: (Bits) Value seq809902 78.8 5e-11 >seq809902 Length=28833 Score = 78.8 bits (86), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 2476 GAAAATATTAACGATAAATTACAATTTGATAAATTATTAAATAGTATGTTTAAGATTTCA 2535 |||||||| || || ||||| ||| |||| | ||||||||| ||||| || Sbjct 12739 GAAAATATAAATTATCAATTAGAATGAAATAATTC--TAAATAGTAGTTTTAAAATAATG 12682 Query 2536 CAGAAATTTTATACTAATTATTTAC--GTACGATTTTTGATTTAGAAAATAATACTTATG 2593 || | ||| ||| || ||||||| ||| | ||||||||||||||||| |||||| Sbjct 12681 CATATTTTTAATAAAAACTATTTACTAGTA--ACGTTTGATTTAGAAAATAAAACTTATA 12624 Query 2594 TTCAAGGTTATAATaaaaaa 2613 |||||| ||| |||||||| Sbjct 12623 ATCAAGGATATGATAAAAAA 12604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24353405306816