Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_004284.1 Length=5908 Score E Sequences producing significant alignments: (Bits) Value seq869423 78.8 3e-11 >seq869423 Length=13889 Score = 78.8 bits (86), Expect = 3e-11 Identities = 104/142 (73%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 1921 TGTATATGAACCAATCTGAATTTGATTTATTACCTCCTGGTAGTAGAGTAGTTGAATGTA 1980 || |||||| | ||| ||||| |||||||| || |||||||||| | ||| | ||| Sbjct 9307 TGCATATGACACCATCCGAATTAGATTTATTGCCAGATGGTAGTAGAATTGTTCATTGTT 9248 Query 1981 ATGTTAAAGTAATATTCA-GAACTAATCGTATTGCATTTGAGACTAGTTCAACTGCTACT 2039 ||| |||||||| | || ||| | | | |||||||| ||||| ||||| || | | Sbjct 9247 CTGTAAAAGTAAT-TGCACGAAATCCTAGAATTGCATTCCCGACTAATTCAAGTGATTCA 9189 Query 2040 AAACAAGCTACATTGAATCAAA 2061 ||| | ||||||||||||| Sbjct 9188 GAACTTTCAACATTGAATCAAA 9167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18506338531940