Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_004290.1
Length=5234
Score E
Sequences producing significant alignments: (Bits) Value
seq1036822 113 1e-21
seq893251 104 8e-19
seq447257 93.3 1e-15
seq353188 87.8 6e-14
seq731020 86.0 2e-13
seq487092 86.0 2e-13
seq369727 86.0 2e-13
seq1026985 84.2 7e-13
seq1006908 84.2 7e-13
seq130590 80.6 9e-12
seq796784 78.8 3e-11
seq474457 78.8 3e-11
>seq1036822
Length=8051
Score = 113 bits (124), Expect = 1e-21
Identities = 183/263 (70%), Gaps = 8/263 (3%)
Strand=Plus/Minus
Query 2029 AAAGTTAATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGAC 2088
||| | |||||| |||||||||||||| | ||||| || || | || |||| |||
Sbjct 7642 AAATTAAATACTTTATGTATAATTGGTCCCCCTAATTCAGGAAAAATTTGGTTTTTTGAC 7583
Query 2089 GCAGTTTGCTGTTTGGGTT----TAAATGTGGGTTTTCTTGGTAGAGTTAATAATAAAAC 2144
||| | ||| || ||||||||||| | | || | |||||||||||
Sbjct 7582 ----TTTATTATTTCACTTGCTCTAAATGTGGGTCATATAGGACGTTGCAATAATAAAAC 7527
Query 2145 TAACAAGTTTGCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGGTAATGAAATATC 2204
|| | ||| |||| |||||| ||| | | ||||||| |||||||||||||||| ||
Sbjct 7526 AAATCAATTTTCTTTACAAGATGCTGTCAATAGACGAATTATAATTGGTAATGAAATTTC 7467
Query 2205 TTTGGAAGATGGAGCAAAGGAGGATATGAAGAAATTATGTGAGGGGTGTCCATTCAATGT 2264
| |||||||||||| |||||| | || || || |||||||| | ||| ||| |
Sbjct 7466 AGTTGAAGATGGAGCATTAGAGGATTTTAAAAATTTTTGTGAGGGTGTTGCATGTAATAT 7407
Query 2265 TAGCGTAAAACATCAATCAGATG 2287
| || ||| | ||| |||||
Sbjct 7406 ATGTGTTAAATACAAATGAGATG 7384
>seq893251
Length=19828
Score = 104 bits (114), Expect = 8e-19
Identities = 156/217 (72%), Gaps = 16/217 (7%)
Strand=Plus/Plus
Query 2029 AAAGTTAATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGAC 2088
||| | |||||| | ||| ||| ||| || ||||| |||||| |||| |||| ||
Sbjct 18987 AAATTAAATACTTTGTGTGCAATAGGTCCTCCTAATTCTGGTAAAAATTGGTTTTTTGAT 19046
Query 2089 GCAGTTTGCTGTTTGGGTT----TAAATGTGGGTTTTCTTGGTAGAGTTAATAATAAAAC 2144
| ||| ||||| | || ||||||| ||| | |||| | || |||||||||||
Sbjct 19047 G---TTT--TGTTTCGCTTGCATTAAATGTTGGTCATATTGGATGTGT-AATAATAAAAC 19100
Query 2145 TAACAAGTTTGCTTTGCAAGATTGTGT---TCACAAACGAATTGTAATTGGTAATGAAAT 2201
||| ||||||||||||||||| ||| || || |||| | ||||| ||||||||
Sbjct 19101 TAATCAGTTTGCTTTGCAAGATGCTGTAAATCGCA---GAATAATTATTGGCAATGAAAT 19157
Query 2202 ATCTTTGGAAGATGGAGCAAAGGAGGATATGAAGAAA 2238
||| |||||||| || | | ||| ||| | || |||
Sbjct 19158 ATCATTGGAAGAAGGTCCTATGGAAGATTTAAAAAAA 19194
>seq447257
Length=2460
Score = 93.3 bits (102), Expect = 1e-15
Identities = 140/193 (73%), Gaps = 16/193 (8%)
Strand=Plus/Plus
Query 2029 AAAGTTAATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGAC 2088
||| | |||||| | ||| |||| ||| ||| ||||| |||||| |||| | || ||
Sbjct 1954 AAATTAAATACTATGTGTGTAATAGGTCATCCTAATTCTGGTAAAAATTGGTCTTCTGAT 2013
Query 2089 GCAGTTTGCTGTTTGGGTT----TAAATGTGGGTTTTCTTGGTAGAGT-TAATAATAAAA 2143
|||| ||||| | || ||||||| ||| | |||| | | | |||||||||||
Sbjct 2014 T--GTTT--TGTTTCGCTTGCGTTAAATGTTGGTCATATTGG-ACATTGTAATAATAAAA 2068
Query 2144 CTAACAAGTTTGCTTTGCAAGATTGTGT---TCACAAACGAATTGTAATTGGTAATGAAA 2200
||| ||||||||||||||||| ||| || || |||| | ||||| |||||||
Sbjct 2069 GTAATCAGTTTGCTTTGCAAGATGCTGTAAATCGCA---GAATAATTATTGGCAATGAAA 2125
Query 2201 TATCTTTGGAAGA 2213
|||| ||| ||||
Sbjct 2126 TATCATTGTAAGA 2138
>seq353188
Length=9271
Score = 87.8 bits (96), Expect = 6e-14
Identities = 152/218 (70%), Gaps = 10/218 (5%)
Strand=Plus/Plus
Query 2107 TTAAATGTGGGTTTTCTTGGTAGAGTTAATAATAAAACTAACAAGTTTGCTTTGCAAGAT 2166
|||||||| ||| | |||| | |||||| |||||||| |||||||||||||||||
Sbjct 5604 TTAAATGTTGGTCATATTGGACGTTGTAATAACAAAACTAATTAGTTTGCTTTGCAAGAT 5663
Query 2167 TGTGTTCACAAAC---GAATTGTAATTGGTAATGAAATATCTTTGGAAGATGGAGCAAAG 2223
||| |||| |||| | ||||| || |||||||| |||||||| || || | |
Sbjct 5664 GCTGT---AAAACGCAGAATAATTATTGGCAACGAAATATCATTGGAAGAAGGTGCTATG 5720
Query 2224 GAGGATATGAAGAAATTATGTGAGGGGTGTCCATTCAATGTTAGCGTAAAACATCAATCA 2283
|| ||| | || ||| | ||| | || | | | ||| || | || ||| || ||
Sbjct 5721 GAAGATTTCAAAAAAGTGTGTAAAGGAATTGCTTGTAATATTTGTGTTAAATATAAAGGC 5780
Query 2284 GATG--GAATTGTTGCCAGGACACCTGTTTGCTTAATT 2319
|||| |||| || | |||||||||| ||||||
Sbjct 5781 GATGCCAAATTAAGGC--GTACACCTGTTTTATTAATT 5816
>seq731020
Length=6298
Score = 86.0 bits (94), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 10/215 (5%)
Strand=Plus/Plus
Query 2035 AATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGACGCAGTT 2094
|||||| | ||| |||| | | || ||||| |||||| |||| |||| | |
Sbjct 4391 AATACTTTGTGTGTAATAGCTCCTCCTAATTCTGGTAAAAATTGGTTTTTT-----ATTC 4445
Query 2095 TGCTGTTTGGGTT----TAAATGTGGGTTTTCTTGGTAGAGT-TAATAATAAAACTAACA 2149
| ||||| | || ||||||| ||| | ||| | | |||||||||||||||
Sbjct 4446 TTTTGTTTCGCTTGCATTAAATGTTGGTCATACTGGACAATTGTAATAATAAAACTAATC 4505
Query 2150 AGTTTGCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGGTAATGAAATATCTTTGG 2209
||||||||||||||||| ||| | |||| | || || ||||||||||| ||||
Sbjct 4506 AGTTTGCTTTGCAAGATGCTGTAAATCGTAGAATAATTATCGGCAATGAAATATCATTGG 4565
Query 2210 AAGATGGAGCAAAGGAGGATATGAAGAAATTATGT 2244
|||| || || | ||| ||| | || ||| | |||
Sbjct 4566 AAGAAGGTGCTATGGAAGATTTAAAAAAAGTGTGT 4600
>seq487092
Length=4135
Score = 86.0 bits (94), Expect = 2e-13
Identities = 153/221 (69%), Gaps = 8/221 (4%)
Strand=Plus/Plus
Query 2029 AAAGTTAATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGAC 2088
||| | |||||| | ||| |||| ||| || ||||| |||||| |||| |||| ||
Sbjct 1975 AAATTAAATACTTTGTGTGTAATAGGTCCTCCTAATTCTGGTAAAAATTGGTTTTTTGAT 2034
Query 2089 GCAGTTTGCTGTTTGGGTT----TAAATGTGGGTTTTCTTGGTAGAGTTAATAATAAAAC 2144
|||| ||||| || ||||||| ||| | | || | ||||||||||||
Sbjct 2035 T--GTTT--TGTTTCTATTGCATTAAATGTTGGTCATATGGGACGTTCTAATAATAAAAC 2090
Query 2145 TAACAAGTTTGCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGGTAATGAAATATC 2204
||| | || |||||||| || ||| | |||| | ||||| |||||||||||
Sbjct 2091 TAATCATCTTTCTTTGCAACATGCTGTAAATCGTAGAATAATTATTGGCAATGAAATATC 2150
Query 2205 TTTGGAAGATGGAGCAAAGGAGGATATGAAGAAATTATGTG 2245
|||||||| |||| | ||| ||| | || ||| | ||||
Sbjct 2151 ATTGGAAGAAAGAGCTATGGAAGATTTCAAAAAAGTGTGTG 2191
>seq369727
Length=10318
Score = 86.0 bits (94), Expect = 2e-13
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 2133 TAATAATAAAACTAACAAGTTTGCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGG 2192
|||||||||||||||| |||||||| |||||| ||| | | | ||||| | |||||
Sbjct 1941 TAATAATAAAACTAACCCTTTTGCTTTACAAGATGCTGTCAATAGAAGAATTATTATTGG 1882
Query 2193 TAATGAAATATCTTTGGAAGATGGAGCAAAGGAGGATATGAAGAAATTATGTGAGGG 2249
||||||||| || ||||| ||||| ||| ||| | |||||| | ||| ||||
Sbjct 1881 TAATGAAATTTCAACTGAAGACAGAGCATTGGAAGATTTTAAGAAAGTCTGTTAGGG 1825
>seq1026985
Length=12243
Score = 84.2 bits (92), Expect = 7e-13
Identities = 148/215 (69%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 2035 AATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGACGCAGTT 2094
|||||| |||||||||||||| || ||||| || || | || |||| | | |
Sbjct 4706 AATACTTTATGTATAATTGGTCCTCCTAATTCAGGAAAAAGTTGGTTTTTTACTGTATTG 4647
Query 2095 TGCTGTTTGGGTTTAAATGTGGGTTTTCTTGGTAGAGTTAATAATAAAACTAACAAGTTT 2154
| | ||| |||| |||||| | | || | ||||||||||| || | |||
Sbjct 4646 TTCAACTTGCTTTTAC--GTGGGTCATATAGGACGTTACAATAATAAAACAAATCAATTT 4589
Query 2155 GCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGGTAATGAAATATCTTTGGAAGAT 2214
||||| |||||| ||| | ||| ||| ||||||||||||||| || | ||||||
Sbjct 4588 GCTTTACAAGATGCTGTCAATCGACGGATTAAAATTGGTAATGAAATTTCAATTGAAGAT 4529
Query 2215 GGAGCAAAGGAGGATATGAAGAAATTATGTGAGGG 2249
|||||| |||||| | || || ||||||||
Sbjct 4528 GGAGCATTAGAGGATTTTAAAAAGGCTTGTGAGGG 4494
>seq1006908
Length=48242
Score = 84.2 bits (92), Expect = 7e-13
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 2134 AATAATAAAACTAACAAGTTTGCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGGT 2193
||||| ||||| || ||||||| || |||||| || ||| || ||| | || ||
Sbjct 18545 AATAACAAAACAAATCAGTTTGCATTCCAAGATGCAATTAACAGACTCATTATCATAGGA 18486
Query 2194 AATGAAATATCTTTGGAAGATGGAGCAAAGGAGGATATGAAGAAATTATGTGAGGG 2249
||||||||||| |||||||| || |||| ||| || | |||||| ||||||| ||
Sbjct 18485 AATGAAATATCATTGGAAGAGGGTGCAATGGAAGACTTTAAGAAAGTATGTGAAGG 18430
>seq130590
Length=34219
Score = 80.6 bits (88), Expect = 9e-12
Identities = 89/116 (77%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 2106 TTTAAATGTGGGTTTTCTTGGTAGAGT-TAATAATAAAACTAACAAGTTTGCTTTGCAAG 2164
||||||||| || || |||| | | | || ||||||||| | |||||||||| ||||
Sbjct 14221 TTTAAATGTACGTCTTATTGG-ACATTGTAGTAATAAAACCGATCAGTTTGCTTTACAAG 14163
Query 2165 ATTGTGTTCACAAACGAATTGTAATTGGTAATGAAATATCTTTGGAAGATGGAGCA 2220
|| | || ||| | || || |||||||||||||||| || | || |||||||||
Sbjct 14162 ATGCTATTAACAGAAGACTTATAATTGGTAATGAAATTTCCATTGATGATGGAGCA 14107
>seq796784
Length=21241
Score = 78.8 bits (86), Expect = 3e-11
Identities = 149/217 (69%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 2035 AATACTGTATGTATAATTGGTAATCATAATTGTGGTAAGAATTATTTTTGGGACGCAGTT 2094
||||| ||||||| |||||| || ||||| ||| || ||| || || | | |
Sbjct 20713 AATACATTATGTATCATTGGTTCTCCTAATTCTGGAAACAATGGTTCTTTGATTGTTTTA 20772
Query 2095 TGCTGTTTGGGTTTAAATGTGGGTTTTCTTGGTAGAGTTAATAATAAAACTAACAAGTTT 2154
| | | | | || ||||| || | | |||||| |||||||||||||||| | |||
Sbjct 20773 TA-TCTCTTGCTTCAAATGATGGGCATATAGGTAGATGTAATAATAAAACTAACCAATTT 20831
Query 2155 GCTTTGCAAGATTGTGTTCACAAACGAATTGT--AATTGGTAATGAAATATCTTTGGAAG 2212
|||||||| |||| ||| | | || ||| | || |||||||| ||||| | |||
Sbjct 20832 GCTTTGCAGGATTCCGTTAATAGGCGTATTATTATATAGGTAATGAGATATCAATATAAG 20891
Query 2213 ATGGAGCAAAGGAGGATATGAAGAAATTATGTGAGGG 2249
| || | | ||||| | || ||| ||||||| ||
Sbjct 20892 AGGGTGGATTAGAGGACTTCAAAAAAGTATGTGAAGG 20928
>seq474457
Length=24147
Score = 78.8 bits (86), Expect = 3e-11
Identities = 116/163 (71%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 2133 TAATAATAAAACTAACAAGTTTGCTTTGCAAGATTGTGTTCACAAACGAATTGTAATTGG 2192
||| || |||| || |||||||||| |||||| | || || | | ||| |||||||
Sbjct 6747 TAACAACAAAATCAATCAGTTTGCTTTACAAGATGCTATTAACTGAAGGATTATAATTGG 6806
Query 2193 TAATGAAATATCTTTGGAAGATGGAGCAAAGGAGGATATGAAGAAATTATGTGAGGGGTG 2252
||||||||| || | ||||||| ||||| ||||| | || ||| | ||||||||
Sbjct 6807 TAATGAAATTTCCATTGAAGATGAAGCAATAGAGGACTTTAA-AAAGTTTGTGAGGGTAT 6865
Query 2253 TCCATTCAATGTTAGCGTAAAACATCAATCAGATGGAATTGTT 2295
| ||| ||| | | ||||| | ||| |||| |||| ||
Sbjct 6866 TGCATGTAATATATGTGTAAAGTACAAATGGGATGCAATTCTT 6908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16382505368220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |