Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_005341.1 Length=6034 Score E Sequences producing significant alignments: (Bits) Value seq235213 84.2 8e-13 >seq235213 Length=11231 Score = 84.2 bits (92), Expect = 8e-13 Identities = 128/178 (72%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 3919 ATTTAAACCAACAGCAGTTTGCAAATTCGATATT-TGATTTAATGTAGCTTGTTTAGTAG 3977 ||| |||||||| | || || ||| |||| |||||||| |||||| | ||||| Sbjct 1417 ATTCAAACCAACTGATGTAATCATATTTT-TATTCTGATTTAAAGTAGCTAACTGAGTAG 1359 Query 3978 CTGTTGAACTAGTCTCAAATGCAATACG--GTTTGAACGAAATATAACTTTAACATTACA 4035 | | ||| | || ||||||| |||||| | || | || ||||||||||||| | || Sbjct 1358 CAGAAGAATTTGTTTCAAATGTAATACGAGGGTT--ATGAGCTATAACTTTAACACTTCA 1301 Query 4036 CTCTACAACTCTAGAACCAGCAGGTAATAAGTCAAACTCTGATTGATTCATATATAAA 4093 | |||| | ||||||| |||||||||| || | |||| | |||| | ||| ||| Sbjct 1300 GTGCACAAAACGAGAACCATCAGGTAATAAATCGTATTCTGCTGGATTTAAATACAAA 1243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18903375592220