Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_009987.1 Length=7870 Score E Sequences producing significant alignments: (Bits) Value seq809902 80.6 1e-11 >seq809902 Length=28833 Score = 80.6 bits (88), Expect = 1e-11 Identities = 108/148 (73%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 5239 GAGAATATTAATGATAAATTACAATTTGATAAATTATTAAATAGTATGTTTAAGATTTCA 5298 || ||||| ||| || ||||| ||| |||| | ||||||||| ||||| || Sbjct 12739 GAAAATATAAATTATCAATTAGAATGAAATAATTC--TAAATAGTAGTTTTAAAATAATG 12682 Query 5299 CAGAAATTTTATACTAATTATTTACGAACGATTTTTGATTTAGAAAATAATACTTATGTT 5358 || | ||| ||| || ||||||| | | ||||||||||||||||| |||||| | Sbjct 12681 CATATTTTTAATAAAAACTATTTACTAGTAACGTTTGATTTAGAAAATAAAACTTATAAT 12622 Query 5359 CAAGGTTATAATAAAAAATATGGTTTAT 5386 ||||| ||| |||||||| ||||| || Sbjct 12621 CAAGGATATGATAAAAAA-GTGGTTAAT 12595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24674673716192