Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_022748.1
Length=5280
Score E
Sequences producing significant alignments: (Bits) Value
seq303765 91.5 5e-15
seq648028 86.0 2e-13
seq430 86.0 2e-13
seq126798 84.2 7e-13
seq1365069 78.8 3e-11
>seq303765
Length=9691
Score = 91.5 bits (100), Expect = 5e-15
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 2274 TAATAATAAGACAAATCAATTTGCCCTTCAAGAATGTTACGGTC-GACGCCTTGTCGTTG 2332
||| ||||| || ||||||||||||||||||| || | | |||| || | ||||
Sbjct 2569 TAACAATAAAACCGATCAATTTGCCCTTCAAGA-TGCTGTAAACAGACGTGTTATTGTTG 2627
Query 2333 GTAACGAAGTAAGCATGGAAGACGGTGCAAAAGAAGATTTTAAAAAGTTGTGTGAAGGCA 2392
|||| ||| | ||||||| ||||| | ||||||||||||||| | |||||||| |
Sbjct 2628 GTAATGAAATTTCATTGGAAGAAGGTGCTATAGAAGATTTTAAAAAAGTTTGTGAAGGAA 2687
Query 2393 CGGCATTCAATATTAGAGTTAAATATCAAGGCGA 2426
|||| || ||| ||| |||||| |||| ||
Sbjct 2688 TAGCATGTAACATTCAAGTAAAATATAAAGGAGA 2721
>seq648028
Length=18282
Score = 86.0 bits (94), Expect = 2e-13
Identities = 177/259 (68%), Gaps = 6/259 (2%)
Strand=Plus/Minus
Query 2170 AAAATGAATGCCTTGTGTGTTATAGGGCCACCGAACAGTGGTAAAAACTATTTCTGGGAT 2229
||| |||| | |||||| || | || ||||| || |||||||| | || | ||
Sbjct 14425 AAATTGAACACATTGTGTATTGTTGGACCACCAAATTCGGGTAAAAATTGGTTTTTTAAT 14366
Query 2230 ATGTTTTGCTCTGTCGCATACAATGTGGGCCACATTGGGCGGGTTAATAATAAGACAAAT 2289
|| ||| | |||| ||||| || || |||| ||| ||||| | ||||
Sbjct 14365 TATTTCATTTCTTTAGCATTGAATGTTGGTCATATTGCTATATGTAACAATAAAAAAAAT 14306
Query 2290 CAATTTGCCCTTCAAGAAT--GTTACGGTCGACGCCTTGTCGTTGGTAACGAAGTAAGCA 2347
|| |||||| ||||||| |||| |||| || | |||||||| ||| | |
Sbjct 14305 CAGTTTGCCATTCAAGATGCAGTTAACA--GACGTGTTATTGTTGGTAAAGAATTTTCAA 14248
Query 2348 TGGAAGACGGTGCAAAAGAAGATTTTAAAAAGTTGTGTGAAGGCACGGCATTCAATATTA 2407
||||||| |||| | | ||||||||||||||||| |||||||| | ||| || |||
Sbjct 14247 TGGAAGAAGGTGGATA-GAAGATTTTAAAAAGTT-TGTGAAGGAATATCATGTAACATTC 14190
Query 2408 GAGTTAAATATCAAGGCGA 2426
| || |||||| |||| ||
Sbjct 14189 GTGTAAAATATAAAGGAGA 14171
>seq430
Length=13990
Score = 86.0 bits (94), Expect = 2e-13
Identities = 134/187 (72%), Gaps = 6/187 (3%)
Strand=Plus/Plus
Query 2239 TCTGTCGCATACAATGTGGGCCACATTGGGCGGGTTAATAATAAGACAAATCAATTTGCC 2298
||| | |||| ||||| || || ||||| | ||| ||||| ||||||||||||||
Sbjct 10510 TCTTTAGCATTGAATGTTGGTCATATTGGTAGATGTAACAATAAAACAAATCAATTTGCT 10569
Query 2299 CTTCAAGA--ATGTTACGGTCGACGCCTTGTCGTTGGTAACGAAGTAAGCATGGAAGACG 2356
|||||||| |||| | |||| || || |||| ||| || | || ||||| |
Sbjct 10570 CTTCAAGATGCAGTTA--ATAGACGTATTATCATTGGAAACAAAATTCCTATTGAAGAAG 10627
Query 2357 GTGCAAAAGAAGATTTTAA-AAAGTTGTGTGAAGGCACGGCATTCAATATTAGAGTTAAA 2415
|||| | || ||||||| |||||| ||||||||| || | |||||| | || |||
Sbjct 10628 GTGCTACGGAGTATTTTAAGAAAGTT-TGTGAAGGCGTAGCTTGTAATATTCGTGTCAAA 10686
Query 2416 TATCAAG 2422
||| |||
Sbjct 10687 TATAAAG 10693
>seq126798
Length=10002
Score = 84.2 bits (92), Expect = 7e-13
Identities = 224/331 (68%), Gaps = 11/331 (3%)
Strand=Plus/Plus
Query 2185 TGTGTTATAGGGCCACCGAACAGTGGTAAAAACTATTTCTGGGATATGTTTTGC-TCTGT 2243
||||| |||||||| || || |||||| | || | || | || ||||| |||||
Sbjct 3650 TGTGTAATAGGGCCTCCTAATAGTGGTCAGAATTGGTTTTTTGAC-TGTTTAATATCTGT 3708
Query 2244 CGCATACAATGTGGGCCACATTGGGCGGGTTAATAATAAGACAAATCAATTTGCCCTTCA 2303
|| ||||| ||||| ||||| || | ||||||| || ||||||||||| ||||
Sbjct 3709 AGCTCTAAATGTAGGCCATATTGGCCG---TTATAATAAAACTAATCAATTTGCACTTCG 3765
Query 2304 AGAATGTTACGGTC-GACGCCTTGTCGTTGGTAACGAAGTAAGCATGGAAGACGGTGCAA 2362
|| ||| | | || | | | ||||| |||||| | ||| ||| | ||||
Sbjct 3766 AG-ATGCTGTAAACAGAAGAATAATAGTTGGGAACGAAATTTCATTGGTAGAAGCTGCAT 3824
Query 2363 AAGAAGATTTTAA-AAAGTTGTGTGAAGGCACGGCATTCAATATTAGAGTTAAATATCAA 2421
||| |||||||| |||||| || ||||| | || | || ||| | ||||||||| ||
Sbjct 3825 TAGACGATTTTAAGAAAGTT-TGCGAAGGTATAGCTTGTAACATTCGTGTTAAATATAAA 3883
Query 2422 GGCGATAAAATATTTAC-TAAAGCACCTGTTCTTCTGATAAGTAACTTTGAACTAGATAT 2480
|| ||| || ||||| | | | ||| | ||| |||| ||| | ||| | | |
Sbjct 3884 GGTGATTCCAT-TTTACGTCGAACTCCTCTACTTTTGATTTCTAATTGCCAACCCGTTGT 3942
Query 2481 ATGTTATGATACACATTTTAAAAATGTACGT 2511
|||| | || | ||| |||| || |||||
Sbjct 3943 ATGTAGTCATCCTGATTGTAAAGATATACGT 3973
>seq1365069
Length=785
Score = 78.8 bits (86), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 2251 AATGTGGGCCACATTGGGCGGGTTAATAATAAGACAAATCAATTTGCCCTTCAAGA--AT 2308
||| |||| || || || || |||||||| |||||||||||| | | ||||| ||
Sbjct 475 AATATGGGTCATATAGGACGCTGCAATAATAAAACAAATCAATTTACTTTACAAGATGAT 416
Query 2309 GTTACGGTCGACGCCTTGTCGTTGGTAACGAAGTAAGCATGGAAGACGGTGCAAAAGAAG 2368
|| | |||||| || | ||||||| | | | || ||||| || ||| ||| |
Sbjct 415 GTCAA--TCGACGAATTATAATTGGTAATGGAATTTCAATTGAAGATGGCGCATTAGAGG 358
Query 2369 ATTTTAAAAAGTTGTGTGAAGGCACGGCATTCAATATTAGAGTTAAATATCAAGGCGAT 2427
||||||||||| | ||||| || | |||| ||||| | ||||| || |||| |||
Sbjct 357 ATTTTAAAAAGGTTTGTGACGGTATTGCATGTAATATGCGTGTTAACTACAAAGGAGAT 299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16527455406100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |