Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_001954.1 Length=8454 Score E Sequences producing significant alignments: (Bits) Value seq229 98.7 5e-17 >seq229 Length=456533 Score = 98.7 bits (108), Expect = 5e-17 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 2670 CGGATACCTGATAAACCATC---ACTGGATGACTTACTGGCAATCGGGAGAGGCAATAAT 2726 ||||| || |||||||| | ||||||| |||| | ||||| ||| |||| Sbjct 1517 CGGATCCCCGATAAACCCACCTTACTGGAT---TTACAATCCATCGGTCTAGGTAATACC 1573 Query 2727 TCCTATGATGAAAATAAAAATGGATTACTGGTTCTTGATGAATGTGGGACATGGTTTAAC 2786 |||||||||||| | || ||||| ||| | ||||| |||||||||||||||||| Sbjct 1574 TCCTATGATGAATCACGTACCGGCTTACTCGTTTTAGATGAGTGTGGGACATGGTTTAAC 1633 Query 2787 TCACGCTCATGGGCTGATAAAGAAAGACAGTCCGTAATTAACTGGTTTTTACATGCCAGA 2846 || || || ||||| |||||| | || | ||| |||||| ||||| | Sbjct 1634 TCTCGTTCTTGGGCCGATAAAAGCCGTCAAGATCTCATTTCGTGGTTTGCGCATGCTCGT 1693 Query 2847 AAACTGGGCTGGGATATTATTTTTCT 2872 ||| |||| ||||| ||||||||||| Sbjct 1694 AAATTGGGTTGGGACATTATTTTTCT 1719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26937080878776