Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_002014.1 Length=6883 Score E Sequences producing significant alignments: (Bits) Value seq229 93.3 2e-15 >seq229 Length=456533 Score = 93.3 bits (102), Expect = 2e-15 Identities = 172/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 3932 GGATTTAGAATCTATTGGTCGCGGTAATTTAACTTATGATGAATCAAAGAATGGCTTATT 3991 ||||||| |||| || |||| |||||| | |||||||||||| | |||||| | Sbjct 1543 GGATTTACAATCCATCGGTCTAGGTAATACCTCCTATGATGAATCACGTACCGGCTTACT 1602 Query 3992 AGTTCTTGATGAATGTGGTACTTGGTTTAACTCAAGAAACTGGAGCGATAAATCAAGGCA 4051 ||| | ||||| ||||| || ||||||||||| | ||| ||||||| | || Sbjct 1603 CGTTTTAGATGAGTGTGGGACATGGTTTAACTCTCGTTCTTGGGCCGATAAAAGCCGTCA 1662 Query 4052 GCCTGTTATTGATTGGTGTTTACATGCACGTAAATTAGGTTGGGATATTATCTTTATTAT 4111 | | ||| |||| | ||||| |||||||| |||||||| ||||| ||| | | Sbjct 1663 AGATCTCATTTCGTGGTTTGCGCATGCTCGTAAATTGGGTTGGGACATTATTTTTCTCGT 1722 Query 4112 TCAGGATATTTC-TCTGATGGATAAGCAAGCGCGTGATGCTTTGGCTGAGCACGTTGTCT 4170 || | || | | | ||||||| ||| || | | | || ||||| || || || | Sbjct 1723 GCA-AAGCTTGCATATAGTGGATAAACAAAGCCGAGTTTCGTTTGCTGAACATGTGGTGT 1781 Query 4171 ATTGTCGTCG 4180 ||||||| || Sbjct 1782 ATTGTCGCCG 1791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21909977759204