Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq229 89.7 2e-14 >seq229 Length=456533 Score = 89.7 bits (98), Expect = 2e-14 Identities = 168/242 (69%), Gaps = 10/242 (4%) Strand=Plus/Plus Query 3404 ATTGGTCGTGGTAATGATTCCTACGACGAAAATAAAAACGGTTTGCTTGTTCTTGATGAA 3463 || |||| |||||| ||||| || ||| | ||| || || ||| | ||||| Sbjct 1556 ATCGGTCTAGGTAATACCTCCTATGATGAATCACGTACCGGCTTACTCGTTTTAGATGAG 1615 Query 3464 TGCGGTACTTGGTTTAATACCCGTTCATGGAATGACAAGGAAAGACAGCC-GATT--ATT 3520 || || || |||||||| | ||||| ||| || || ||| | | ||| ||| Sbjct 1616 TGTGGGACATGGTTTAACTCTCGTTCTTGGGCCGATAA---AAGCCGTCAAGATCTCATT 1672 Query 3521 GATTGGTTTCTTCATGCTCGTAAATTGGGATGGGATATTATTTTTCTTGTTCAGGATTTA 3580 |||||| ||||||||||||||||| ||||| ||||||||||| || || || Sbjct 1673 TCGTGGTTTGCGCATGCTCGTAAATTGGGTTGGGACATTATTTTTCTCGTGCAAAGCTTG 1732 Query 3581 TCTATTGTTGATAAAC--AGGCGCGTTCTGCATTAGCTGAACACGTTGTTTATTGTCGCC 3638 ||| || ||||||| || || || | | || |||||||| || || |||||||||| Sbjct 1733 CATATAGTGGATAAACAAAGCCGAGT--TTCGTTTGCTGAACATGTGGTGTATTGTCGCC 1790 Query 3639 GT 3640 || Sbjct 1791 GT 1792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20390007051504