Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_001331.1 Length=7349 Score E Sequences producing significant alignments: (Bits) Value seq72255 2544 0.0 seq55552 181 5e-42 seq66035 111 7e-21 >seq72255 Length=2925 Score = 2544 bits (2820), Expect = 0.0 Identities = 1444/1465 (99%), Gaps = 1/1465 (0%) Strand=Plus/Minus Query 2214 GGCCCCGAAGGCCCCGGCGGCGAACTCAAGGAACCCACGCCCGGCACCTGGGATGACGCC 2273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2016 GGCCCCGAAGGCCCCGGCGGCGAACTCAAGGAACCCACGCCCGGCACCTGGGATGACGCT 1957 Query 2274 ATCGCCACCTGGGAAAAGAAGGTCGAGGAAGCCAAGAAAGAACTCAAGACCAAGGTGAAG 2333 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1956 ATCGCCACCTGGGAAAAGAAGGTCGAGGAAGCCAAGCAAGAACTCAAGACCAAGGTGAAG 1897 Query 2334 GCCAACGTCGACCAGATGAAGGGTGCCTTCGACCTCAACCTGGCGGAAGGCGGCGGGCAA 2393 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1896 GCCAACGTCGACCAGATGAAGGGCGCCTTCGACCTCAACCTGGCGGAAGGCGGTGGGCAA 1837 Query 2394 CTGCCCTGCGAGTCCATGACCATTTGGGGCAAGTCCTACTCCCTCTGTATCTCCGACTAC 2453 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1836 CTGCCCTGCGAGCCCATGACCATTTGGGGCAAGTCCTACTCCCTCTGTATCTCCGACTAC 1777 Query 2454 GCCGGCCAACTCTCCAGCCTGCGCGTGGCGCTGCTGCTGATGGCCGCGCTGATCGCCGCC 2513 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1776 GCCGGCCAACTCTCCAGCCTGCGCGTGGCGCTGCTGCTAATGGCCGCGCTGATCGCTGCC 1717 Query 2514 CTCATTCTGCTGAAGGACTGACCCTATGGAATGGCTCTCCGGTTTCCTCGATCAGATCAT 2573 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1716 CTCATTCTGCTGAAGGACTGACCCTATGGAATGGCTCTCCGGTTTTCTCGATCAGATCAT 1657 Query 2574 CGCCTTCTTCCAGTGGATCTGGGACTTCTTCGCCCAAGGCATCTATGACTTCGTGCGCGA 2633 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1656 CGCCTTCTTCCAGTGGATCTGGGATTTCTTCGCCCAAGGCATCTATGACTTCGTGCGCGA 1597 Query 2634 CGGCCTGGTGGTCGCCACCAAGGCGTCGATGTACGCCGCGCTCCAGACCCTGATCCTGCT 2693 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1596 CGGCCTGGTGGTTGCCACCAAGGCGTCGATGTACGCCGCGCTCCAGACCCTGATCCTGCT 1537 Query 2694 GATCGATGTCAGCTACACCGCCGCCCGCGAACTGATCGACAGCCTTGGCGTGCCGCAGAT 2753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1536 GATCGATGTCAGCTACACCGCCGCCCGCGAACTGATCGACAGCCTTGGCGTGCCGCAGAT 1477 Query 2754 GATCCGCAGCATGTATGCCGCGCTGCCGGGTCCGATTGCGGCGGGGCTGGCCTTCTTCGG 2813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1476 GATCCGCAGCATGTATGCCGCGCTGCCGGGTCCGATTGCGGCGGGGCTGGCCTTCTTCGG 1417 Query 2814 CGTGCCGCAGGCGCTGAACATCATCATGGGTCGCGGCGGCGACGCGCTTCTGCATGCGCT 2873 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1416 CGTGCCGCAGGCGCTGAACATCATCATGG-TCGCGGCGGCGACGCGCTTCTGCATGCGCT 1358 Query 2874 TCGTGCCGTTCATTGGGAGGTGATCCGTGTCGATCAAGATCCATCACGGCCCCAATGGCT 2933 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1357 TCGTGCCGTTCATTGGGAGGTGATCCGTGTCGATCAAGATCCATCACGGCCCCAATGGCT 1298 Query 2934 CCTACAAAACCTCCGGCGCGATCCAGGATGACGCCGTGCCCGCGCTGAAAGACGGGCGGG 2993 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1297 CCTACAAGACCTCCGGCGCGATCCAGGATGACGCCGTGCCCGCGCTGAAAGACGGGCGGG 1238 Query 2994 TGATCATCACCAACGTGCGCGGCTTCACCCTGGAGCGGGCCTATCAGGTCTTCCCGGACC 3053 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1237 TGATCATCACCAACGTGCGCGGCTTCACCCTGGAGCGGGCCTATCAGGTCTTCCCGGACC 1178 Query 3054 TGCCCAACACGGCGGAAATCATCAACCTCGATCTGGAGTCGCTGGAAGACCTCGAAAAGA 3113 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1177 TGCCGAACACGGCGGAAATCATCAACCTCGATCTGGAGTCGCTGGAAGACCTCGAAAAGA 1118 Query 3114 TGCGCACGTGGTTTCAGTGGGCGCCCCGCGGTGCCTTCCTGATCTTCGACGAAACCCAAC 3173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1117 TGCGCACGTGGTTTCAGTGGGCGCCCCGCGGTGCCTTCCTGATCTTCGACGAAACCCAAC 1058 Query 3174 TGCTGTTTCCCAAGTCCTGGCGGGAAAAAGACCTCGAGCGCTTCGACTACCCCGGTGGAC 3233 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1057 TGCTGTTTCCCAAATCCTGGCGGGAAAAAGACCTCGAGCGCTTCGACTACCCCGGTGGAC 998 Query 3234 CGGAAGCGGCCCACGCGGCCGACCGCCCCATGGGCTGGCTCGACGCTTGGACCCGGCACC 3293 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 997 CGGAAGCGGCCCACGCGGCCGACCGCCCCATGGGCTGGCTCGACGCCTGGACCCGGCATC 938 Query 3294 GGCATTTCAACTGGGACATTGTCCTCACCACGCCGAACATCTCCTACATCCGCGACGATA 3353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 937 GGCATTTCAACTGGGACATTGTCCTCACCACGCCGAACATCTCCTACATCCGCGACGATA 878 Query 3354 TCCGCATGACCTGCGAGATGGCCTACAAGCATTCCAACCTCGCGGTGATCGGCATCCCTG 3413 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 877 TCCGCATGACCTGCGAGATGGCCTACAAGCATTCCAACCTCGCGGTGATCGGCATTCCCG 818 Query 3414 GCCGCTACAAGGAGGCCCAGCATGACGCCCAACTCAACCGTCCGCCCGCCGATGGCACCA 3473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 817 GCCGCTACAAGGAGGCCCAGCATGACGCCCAACTCAACCGTCCGCCCGCCGATGGCACCA 758 Query 3474 TCATCGAATACAAGCGGATCCGAAAGCAGACCTTCGCCCTCTACCAGTCCACGGCCACCG 3533 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 757 TCATCGAGTACAAGCGGATCCGAAAGCAGACCTTCGCCCTCTACCAGTCCACGGCCACCG 698 Query 3534 GCAAGACCCAAGACACCAAGGCGGGCAAGAGCCTCTTCCGGTCGCCTAAGCTGGTTCTTC 3593 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 697 GCAAGACCCAAGACACCAAGGCCGGCAAGAGCCTCTTCCGGTCGCCTAAGCTGGTTCTTC 638 Query 3594 TACTGGCATTGCTGGCCGGCACTATTGGCTTTGTCTGGTATATGGGGCCTCTGCGCACGA 3653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 637 TACTGGCATTGCTGGCCGGCACTATTGGCTTTGTCTGGTATATGGGGCCTCTGCGCACGA 578 Query 3654 TTGGCGGTCCGGCTGCTGCGACACC 3678 |||||| |||||||||||||||||| Sbjct 577 TTGGCGCTCCGGCTGCTGCGACACC 553 Score = 641 bits (710), Expect = 2e-180 Identities = 399/435 (92%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 1602 TGTGAGCCGCCGCCCAAGGAGTGTAAGGAAGGCGAACTGTTCCCGGCCAAGGGCCCGGAC 1661 ||| |||| ||| | || || |||||||||||||||||||||||||||||||||||| Sbjct 2786 TGTAAGCCTAAGCCGCAAGAATGCAAGGAAGGCGAACTGTTCCCGGCCAAGGGCCCGGAC 2727 Query 1662 TCGCCCGTAGTTACCTCGGGAGGCCGTAACTATGTCGGTGACGGCGGCGCCCCGACCGCC 1721 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2726 TCGCCCGTAGTTACCTCGGGAGGCCGTAACTATGTCGGTGACGGCTGCGCCCCGACCGCC 2667 Query 1722 TGCTATCAAAGCTGTGAGTATGGCGGCAATCCCAGCCCGGCCAGTTGCTATCTGGTCAAA 1781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2666 TGCTATCAAAGCTGTGAGTATGGCGGCAATCCCAGCCCGGCCAGTTGCTATCTGGTCAAA 2607 Query 1782 GGCTCCACCACGACGGGCTTCTGCAATTACATCCTCAAGGGCACCGGCCAAAGCTGCGGT 1841 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 2606 GGCTCCACCACGACGGGCTTCTGCAACTACATTCTCAAGGGCACCGGCCAAAGCTGCGGT 2547 Query 1842 GCCGACTCCTACACCTTCTCCCAAACCGGCGATTCGCTGAACCCGCCCGACACTCCGAAC 1901 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2546 GCCGACTCCTACACCTTCTCCCAGACCGGCGATTCGCTGAACCCGCCCGACACTCCGAAC 2487 Query 1902 ACCGATCCCTCCGACCCGAACGACCCCGGCTGCCCGCCCGGCTGGTCGTGGTCGGGGACT 1961 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2486 ACCGATCCTTCCGACCCGAACGATCCCGGCTGCCCGCCCGGCTGGTCGTGGTCGGGGACT 2427 Query 1962 ACCTGCGTCAAGACCCCGACCGATCCCNNNNNNNNNNNNNNNNNNNNNACGCCGGGCGGT 2021 ||||||||||||||||||||||||||| |||||||||||| Sbjct 2426 ACCTGCGTCAAGACCCCGACCGATCCCACGGATCCAACCGACCCGACCACGCCGGGCGGT 2367 Query 2022 GACGGCGGCGGCGAT 2036 ||||||||||||||| Sbjct 2366 GACGGCGGCGGCGAT 2352 Score = 334 bits (370), Expect = 4e-88 Identities = 196/203 (97%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 3837 GGCGGATCTCCATCCTCGCCCATGCCTACCGCAAGTCGCGGGGCGACATTTACATGTTCG 3896 |||||||||||||||| ||||| ||||||||| ||||||||||||| || ||| |||||| Sbjct 203 GGCGGATCTCCATCCTTGCCCACGCCTACCGCCAGTCGCGGGGCGATATCTACCTGTTCG 144 Query 3897 CCCTGGAGGATCCCACGGGCCGGCACCTGGAACTCACCAGCTGGCAACTGATCGGCTCCG 3956 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 143 CCCTGGAGGATCCCACGGGCCGGCGCCTGGAACTCACCAGCTGGCAACTGATCGGCTCCG 84 Query 3957 GCTACCGGGTGACGCCCAAGGGCGAGTGCGTCGTAGAGCTTCGCTATGAGGACTGGAAAC 4016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 GCTACCGGGTGACGCCCAAGGGCGAGTGCGTCGTAGAGCTTCGCTATGAGGACTGGAAAC 24 Query 4017 AGACCGTCACCTGTGCCGGGAGG 4039 ||||||||||||||||||||||| Sbjct 23 AGACCGTCACCTGTGCCGGGAGG 1 Score = 279 bits (308), Expect = 2e-71 Identities = 160/164 (98%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 2169 GATGGCAACGGTACATGCGACCCGGCGAAAGAGAACTGCTCCACCGGCCCCGAAGGCCCC 2228 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2182 GATGGCAACGGCACCTGCGACCCGGCGAAAGAGAACTGCTCCACCGGCCCCGAAGGCCCC 2123 Query 2229 GGCGGCGAACTCAAGGAACCCACGCCCGGCACCTGGGATGACGCCATCGCCACCTGGGAA 2288 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2122 GGCGGCGAACTCAAGGAACCCACGCCCGGCACCTGGGATGACGCCATCGCGACCTGGGAA 2063 Query 2289 AAGAAGGTCGAGGAAGCCAAGAAAGAACTCAAGACCAAGGTGAA 2332 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2062 AAGAAGGTCGAGGAAGCCAAGAAAGAACTCAAGACCAAAGTGAA 2019 Score = 269 bits (298), Expect = 1e-68 Identities = 158/164 (96%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 3753 CGAATAGCTTTCTTCCTCCTGGGCTTGTACCTGATGGGCCTGCTGCTGCGCCTGTTGATC 3812 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 364 CGAATAGCTTTCTTCCTCCTGGGCTTGTACCTGATGGGCCTACTGCTGCGCCTGTTGATC 305 Query 3813 TGAACGCCCATCCCTTCGCCGATCGGCGGATCTCCATCCTCGCCCATGCCTACCGCAAGT 3872 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| Sbjct 304 TGAACGCCCATCCCTTCGCTGATCGGCGGATCTCCATCCTTGCCCACGCCTACCGCAAGT 245 Query 3873 CGCGGGGCGACATTTACATGTTCGCCCTGGAGGATCCCACGGGC 3916 ||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 244 CGCGGGGCGACATTTACCTGTTCGCCCTGGACGATCCCACGGGC 201 Score = 172 bits (190), Expect = 3e-39 Identities = 95/95 (100%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 3753 CGAATAGCTTTCTTCCTCCTGGGCTTGTACCTGATGGGCCTGCTGCTGCGCCTGTTGATC 3812 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 CGAATAGCTTTCTTCCTCCTGGGCTTGTACCTGATGGGCCTGCTGCTGCGCCTGTTGATC 419 Query 3813 TGAACGCCCATCCCTTCGCCGATCGGCGGATCTCC 3847 ||||||||||||||||||||||||||||||||||| Sbjct 418 TGAACGCCCATCCCTTCGCCGATCGGCGGATCTCC 384 >seq55552 Length=74078 Score = 181 bits (200), Expect = 5e-42 Identities = 115/125 (92%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 6311 TACCTCGTAGAGATTTGCACCTTCCACGGTCCGACCCGGCAACGTCGCTGGCATCGCGTC 6370 |||||||||||||| |||||| ||||||| ||||||||||| || ||||||||||||||| Sbjct 64142 TACCTCGTAGAGATGTGCACCCTCCACGGCCCGACCCGGCAGCGCCGCTGGCATCGCGTC 64083 Query 6371 CATCAGGGCGGTTCCCGCGTGGAATGCCAACGCTGGGTCGAAGAGTTGGTGGCTGTCTTC 6430 |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct 64082 CATCAGGGTATTTCCCGCGTGGAATGCCAGCGCTGGGTCGAAGAGTCGGTGGCTGTCTTC 64023 Query 6431 CCGAC 6435 ||||| Sbjct 64022 CCGAC 64018 >seq66035 Length=113928 Score = 111 bits (122), Expect = 7e-21 Identities = 140/187 (75%), Gaps = 14/187 (7%) Strand=Plus/Plus Query 6886 GGTCAAGGGCCGCGCTCCCGGCTCGTCGGAACAGCTTCACCGTTCCGGCGAACGGAAGCA 6945 |||||||||||||| ||||||| ||| | |||| || | | | |||||| | Sbjct 107560 GGTCAAGGGCCGCGACCCCGGCTTGTCAGC---GCTTG--CGGT--GACAAACGGAGTCC 107612 Query 6946 CGGGCGGAGCGCACCCTTGAACG-CCTCCCCCCTGAAACAGCCTCCGCTTGGGAGTGTGG 7004 ||||||||||| |||||||| | |||| || ||||||||| ||| ||||| | || Sbjct 107613 CGGGCGGAGCGAACCCTTGAGCCACCTCGACC----AACAGCCTCAGCTCGGGAGGGAGG 107668 Query 7005 GGCAGCTTCTCCGCCCCGCGCTCCCGAGCACTCGGCGGCAAGAGCGGGATGACAAGGGCA 7064 | ||||| |||| ||| |||| |||| |||||||||||||||||| || |||||| Sbjct 107669 GACAGCTCTTCCGTCCCTGCCTCCTGAGCCCTCGGCGGCAAGAGCGGGTTG--TAGGGCA 107726 Query 7065 GAGCCCT 7071 | ||||| Sbjct 107727 GCGCCCT 107733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23377271930656