Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_015586.1
Length=5819
Score E
Sequences producing significant alignments: (Bits) Value
seq1835 1995 0.0
seq1833 188 3e-44
>seq1835
Length=3957
Score = 1995 bits (2212), Expect = 0.0
Identities = 1297/1424 (91%), Gaps = 0/1424 (0%)
Strand=Plus/Minus
Query 1 ATGGTCGGTGATCGCGCGGTGCTGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGGAGTC 60
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2312 ATGGCCGGTGATCGCACGGTGCTGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGGAGTC 2253
Query 61 AGTGAATTCAGGAACCCCGAGGGAACCCTGACGGTCGGCATTGACTGGTTCTCCGCTTCC 120
||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2252 AGTGAATTCAGGAACGCCGATGGAACCCTGACGGTCGGTATTGACTGGTTCTCCGCTTCC 2193
Query 121 ATCGATCTGCGCGCAGCGCTGGACGAGGTTGCGTTCCGTGATGGCGACAGTTTCGAAGAG 180
|||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 2192 ATCGATCTGCGCGCAGCGCTGGACGAACTTGCGTTCCGTGATGGCGACAGCTTCGAAGAG 2133
Query 181 GTCCGCCAGTGGATCGAGTTCTCCCCGGACAATGCCCGCATTGCGGCCTTGCAGGTGTTC 240
||||||||||||||||||||||||||||| || || || || |||||| |||||||||||
Sbjct 2132 GTCCGCCAGTGGATCGAGTTCTCCCCGGAGAACGCACGTATCGCGGCCCTGCAGGTGTTC 2073
Query 241 TGCTGGTTCTTCGCCGGTCTGGGTCTTGAACTGGATGAAACGGCCGGCGGCGGCCGCTTC 300
|||||||||||||| || || || ||||||||||||||||| ||||| || || ||||||
Sbjct 2072 TGCTGGTTCTTCGCTGGGCTTGGCCTTGAACTGGATGAAACAGCCGGTGGTGGTCGCTTC 2013
Query 301 TACACGTGGCGAATCAAGATCATCGACGCGGCCAAGAAGTTCGTCGGGATGATCGAACTG 360
||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2012 TACACGTGGCGTATCAAGATCATCGACGCGGCCAAGAAGTTCGTTGGCATGATCGAACTG 1953
Query 361 GGTGGCGAAAAGTGCCGCCGCGCAGATGGTACGTATACCGCCCGCATCGAGCTAACCGGT 420
|| || || | ||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct 1952 GGCGGTGAGGAATGCCGCCGCGCGGATGGCACGTATACCGCCCGCATCGAACTGACCGGC 1893
Query 421 GATGGATGCAAGGCGATTAGCGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGAGCTT 480
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 GATGGATGCAAGGCAATAGGCGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGAGCTT 1833
Query 481 CGAGCGAAGCTCGAAAGCTGCGCCGGGAGGATCACCCGTGTCGATGTGTGCGCCGATGAC 540
||||||||||||||||||||||||| |||||||||||||| || || || |||||||||
Sbjct 1832 CGAGCGAAGCTCGAAAGCTGCGCCGCAAGGATCACCCGTGTTGACGTCTGTGCCGATGAC 1773
Query 541 CTGGTGGGCGATTACCCGTTGCGCATGGCACAGAAGTGGTACGCCAATGGCGACTTCGAC 600
|||||||||| ||||| |||||| | || ||||||||||||| | ||||| ||| ||
Sbjct 1772 TTGGTGGGCGAATACCCATTGCGCCTCGCGCAGAAGTGGTACGAGGAAGGCGAGTTCAAC 1713
Query 601 AACCGTGGTCAGCGCCCCAAGGCGCAGCTGGTGGACGACTACGACAGCGGCGACGGCAAG 660
|| || |||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct 1712 AATCGCGGTCAGCGCCCCAAAGCACAGCTGGTGGACGACTACGACAGCGGTGACGGCAAG 1653
Query 661 ACGTTCTATGTGGGCGGCAAGAAGTCGGAGAAGCAACTGCGCGTCTACGAGAAGGGCAGG 720
||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1652 ACGTTCTATGTCGGTGGCAAGAAGTCGGAAAAGCAGCTGCGCGTCTACGAGAAGGGCAGG 1593
Query 721 GAACAAGGCGACAAGAGTTCGCCGTGGGTGCGCTATGAGGCGCAGTTCCGCAACTCCAAT 780
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 GAGCAGGGCGACAAGAGTTCGCCGTGGGTGCGCTATGAGGCGCAGTTCCGCAACTCCAAC 1533
Query 781 CGCAAGGAACTGCCGCTCGACATTCTGCGTGATCCGGCCTCCTACCTGCTCGGGGCTTAT 840
|||||||||||||||||||||||||||||||||||||| || |||||||| || ||||||
Sbjct 1532 CGCAAGGAACTGCCGCTCGACATTCTGCGTGATCCGGCGTCTTACCTGCTGGGTGCTTAT 1473
Query 841 CCGGTCCTGTCCTTTCTGCGCTGTGTTGCTACGCGCATCGAAATCACGAAAGCCGCCGTT 900
|| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1472 CCAGTCCTGTCCTTTCTGCGGTGCGTTGCTACGCGCATCGAAATCACGAAAGCCGCCGTT 1413
Query 901 GAGGCGACGTGGAAGAGCGTCCGTCGCCACATCCGCCGCCAGTACGGCGCGGCCCTCAAT 960
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1412 GAAGCGACGTGGAAGAGCGTTCGTCGCCACATCCGCCGCCAGTACGGCGCGGCCCTCAAT 1353
Query 961 TTCATCGCCAAGAACTGCCCAGACGATCAGGCATTGCGGGCGGTAATCGAATCCTGCACT 1020
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1352 TTCATCGCCAAGAACTGTCCTGACGATCAGGCATTGCGGGCGGTAATCGAATCCTGCACT 1293
Query 1021 TCGCCATCGCTGCCGAAGTGGGTCACAGGTGACACAGCAGCGCACTGGCCCGAAATCGCG 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 TCGCCATCGCTGCCGAAGTGGGTCACAGGTGACACAGCAGCGCACTGGCCCGAAATCGCG 1233
Query 1081 GCCGTACAGCCAACCTCAAAGGGGTAACAACACATGAGCATCAAGGTCACCGTCCTCAAG 1140
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1232 GCCGTACAGCCAACCTCAAAGGGGTAACAGCACATGAGCATCAAGATCACCGTCCTCAAG 1173
Query 1141 AACGAAATTGACGAACGCGGCGGCAGCTTCAAGAACGACGCTGGCGAGAACGTGGAATAC 1200
| |||||| || ||||||| ||||||||||||||| ||| ||||| |||| | | |
Sbjct 1172 AGCGAAATCGATGAACGCGTCGGCAGCTTCAAGAATGACAAGGGCGAAGACGTCAAGTTC 1113
Query 1201 ACCACCCGCAAGCAGAAGGCCAAGCTGGAAACCGGTGGTTTTGCCTACCCGTTCGACGTG 1260
||||| |||||||||||||||||||||||||||| || || ||||| || || ||||||
Sbjct 1112 ACCACTCGCAAGCAGAAGGCCAAGCTGGAAACCGCAGGCTTCGCCTATCCATTTGACGTG 1053
Query 1261 CGCCTGGACAAGGGTCAGCCGGGCTACCCCGAGGGCGAGTACGAGCTCGATGTTGAATCC 1320
|||||||| | |||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct 1052 CGCCTGGAGGATGGTCAGAGCGGCTACCCCGAAGGCGAGTACGAGCTCGATGTTGATTCC 993
Query 1321 ATGTTGCAGGTCAACAAGGGCGTTGCCTCGCTGAGCAAGTTCACCGTGCTGCGCCCGCTG 1380
||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||
Sbjct 992 ATGTTGCAGGTCAACAAGGGCGTCGCCTCGCTGAGCAAGTTCACCGTTCTGCGCATGGTG 933
Query 1381 CAGAAGGCTGCGCCACGCCCGGCAGCGCAGGCCTGAGTCATGGC 1424
| ||| | || || ||| | || || ||||||| |||||||||
Sbjct 932 CCCAAGCCCGCACCCCGCGCAGCCGCTCAGGCCTAAGTCATGGC 889
Score = 650 bits (720), Expect = 0.0
Identities = 730/973 (75%), Gaps = 74/973 (8%)
Strand=Plus/Minus
Query 4914 GAACATAATATACATACCGCCGTTCTCGGCGCCGCTAACCGCCTGAATTTGGGCGGTTTT 4973
|||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||
Sbjct 3278 GAACATAATATACATACCACCGTTGTCGGCAGCGCTAACCGCCTGAATCTGGGCGGTTTT 3219
Query 4974 TGCGTTTGCGAGGCCCGGCATCGACAGCGCTACCAGCGCGACGACCGCAGCCGCCGCGCC 5033
|||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3218 TGCGTTTGCGAGACCGGGCATCGACAGCGCTACTAGCGCGACGACCGCAGCCGCCGCGCT 3159
Query 5034 CATTCGGTCCAGCATCAACCGCCAGAGCGCACGTTCGGTTGCCGTCGTTGCGCGCTCTGC 5093
||||| ||||||||| | ||||| || || ||||||||||| | ||| |||||||| ||
Sbjct 3158 CATTCTGTCCAGCATGAGGCGCCATAGGGCCCGTTCGGTTGCAGACGTGGCGCGCTCGGC 3099
Query 5094 ATGAATCATGGCGATCCAAGTCGGGCCATCGAGCTTCGCCAGCGCGCAAATTTGCGCAAT 5153
||| |||||||||||||| || |||||||| |||||||||||||||||||| ||||||||
Sbjct 3098 ATGGATCATGGCGATCCACGTGGGGCCATCCAGCTTCGCCAGCGCGCAAATCTGCGCAAT 3039
Query 5154 TCGTTCATCTGAGAGCGGCTTCTCGCCC--GCGCGAGCCTTCGACAGCAGCTGCCTCTGA 5211
||| ||||| | |||||| | |||||| ||| ||| || | |||| || |
Sbjct 3038 TCGCTCATCGGCCAGCGGCGTGTCGCCCTTCCGCCAGC--GAGATACCAGCGACCGGGTA 2981
Query 5212 ATTCCCAGTCGAGCCGCCAAAGCGTTGTCTGA--CGGGATTCCCGTGCGTTCGCGGGCGG 5269
| ||| | | |||||||| | || || || ||||| | | || | ||
Sbjct 2980 ACAGTCAGCCTTTCAGCCAAAGCCATATCGGACGCGAGATTCAAGCGACTTTTC--ACGT 2923
Query 5270 CATCGAGCAGTTCACCTACGGCGGTCATG--GTTTCCTCTTG--------GTTGACAACG 5319
|| || ||||| |||||||||||| | ||| ||| |||||| |||
Sbjct 2922 TGTCAAGTAGTTCGTTGACGGCGGTCATGGCGGCTCCAGTTGATCGATCAGTTGAC-ACG 2864
Query 5320 TGTGGTCCTTTTAGATTACATGCTCCGCGTGGTCCAGAT-GGACCGCACCCGCCAACGGC 5378
||| || | || |||||||| || ||| | ||| | ||||||||| ||||
Sbjct 2863 TGTTTCCCGATCAGTTTACATGCGCCTCGTTG-AGTGATCACTCAACACCCGCCACCGGC 2805
Query 5379 ACCCCAAGGCCGCTGGCGGGTTTCCTTGGGGCTTGGGGTAGGGGAACAGGGATGATCGAT 5438
|||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct 2804 ACCCCAAGGCCGCTGGCGGGTTCTCTTGGGGCTTGGGGCAGGGGAGCAGGGATGATCGAT 2745
Query 5439 CCGCTCATTACCTTCGCGCTGCTGGCCGCCATCGTGGCCGTGTCCATTGGCGGCGCTCGC 5498
||| ||||| |||||| ||||||||| |||||||||||||| ||||||||| ||||
Sbjct 2744 CCGTTCATTGCCTTCGTGCTGCTGGCGGCCATCGTGGCCGTATCCATTGGCAGCGCCAAA 2685
Query 5499 ATCGTTTCGTGGTTGCTCGACCGGCGT---GAGTACAC----CGCCGCGCA---GCAGCT 5548
|||||||||||| |||||||||||| |||| | | ||| ||||| | |||
Sbjct 2684 CTCGTTTCGTGGTGCCTCGACCGGCGTGGGGAGTCCGCCCGTCGCAGCGCACACGAAGCG 2625
Query 5549 GC--GCGAAGCCCAGG---TCATCGCACTCGC---------------------------- 5575
|| || |||||||| | || ||| ||
Sbjct 2624 GCCTTCGTAGCCCAGGCACGCGCCGAACTGGCCGCAACCGGCTGGACCCCGGATCACGAA 2565
Query 5576 --------GCGGGCCGAGATTGCGGCCACGAAGCGCGGTGATCTGCTCGCTGCCGCTGAG 5627
| |||||| || |||||||| ||||||||||||||||| | |||||| |
Sbjct 2564 ACGCCCTATCAGGCCGAAATCGCGGCCACCAAGCGCGGTGATCTGCTGACCGCCGCT-CG 2506
Query 5628 CT-GGCCGAAGCCCAGGAGCGAGTCGCATGAGCATCCATACCTTTGCCGCCGAACTTGCG 5686
|| || |||| |||||||| | |||||||||| | ||| |||||| || |||
Sbjct 2505 CTACGCAGAAGAGCAGGAGCGCGCCGCATGAGCAGGTTTCCCTCATTCGCCGAGCTGGCG 2446
Query 5687 GAGGCCGATATGGGCCTTTTCGCATGCGCTGCGCTGATTGTCGCTTGCCTCGGCAGCGCA 5746
||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||
Sbjct 2445 GAGTTAGATATGGGCCTTTTCGCATGCGCGGCGCTGATTGTCGTCAGCCTCGGCGCCGCA 2386
Query 5747 ATAGCTTCAATCGTGATTGAGCAGTCATGGCTTGCGATCCGTCGCCTGTGGAAGCTCTGG 5806
|| ||||||||||||||||||| | ||||||||||| | || |||||||||||||| |||
Sbjct 2385 ATGGCTTCAATCGTGATTGAGCGGGCATGGCTTGCGCTTCGCCGCCTGTGGAAGCTTTGG 2326
Query 5807 AAGGGCCGCGCCA 5819
||||||||| |||
Sbjct 2325 AAGGGCCGCACCA 2313
>seq1833
Length=3524
Score = 188 bits (208), Expect = 3e-44
Identities = 279/391 (71%), Gaps = 36/391 (9%)
Strand=Plus/Plus
Query 4469 CCGGGGTGTAGGGGCAGCGCCCCTACGGAAGCGCTTCACACGCGCTGGCGAGGTATCGGC 4528
|||||||||||||||||||||||||||||| ||||||||||||||| ||| | | |||
Sbjct 2330 CCGGGGTGTAGGGGCAGCGCCCCTACGGAAACGCTTCACACGCGCTCGCGGCGCTTTGGC 2389
Query 4529 CCCGGTACCGGTAGGACTGCTGCCGGCGGTTCGGCGTCGGGGCCAGCCATCGCCCCCGAT 4588
|||||| |||||||| ||||||| | || ||||||||||| |||||||||||| |||
Sbjct 2390 CCCGGTTCCGGTAGGTCTGCTGCGGCTGGCTCGGCGTCGGGTCCAGCCATCGCCACCGCC 2449
Query 4589 GACCGCCTTTCTCGGCGATG--TGCCAAGGCATCGGAGAGGTTCACCACGCTGGC----- 4641
|| ||| | | ||| || | ||| |||| || || || || ||||
Sbjct 2450 GAACGC---TGTTTGCGTTGGCTTACAA--CATCCCGCAGATTGACGACAGTGGCAGGAC 2504
Query 4642 ---GGCG-TTGAAGGACAAGGGTTTCCGT---------GTTTTGCCGTTTG-CGCGGCCG 4687
|||| || || | | || ||| | || || | | || ||||
Sbjct 2505 GCTGGCGAATGCCGGCGTCGCGATTGCGTACATTCTTGGAACTGTCGATCGACGGCGCCG 2564
Query 4688 CTC--------TCCATCATCCGCCGCCATTCCTGCGCCTGCGCA-GCAGTGAGCGACAGC 4738
| | ||||||||||| |||||||||||||| || ||| || ||||||||||||
Sbjct 2565 CACGGGCAGCTTCCATCATCCGGCGCCATTCCTGCGCTTG-GCAGGCGGTGAGCGACAGC 2623
Query 4739 CAGGCCAGATCTTCGGGCAGCAACTCGCGGCCTTCGGGTGTGACCAGTCGGCCAGCCTTA 4798
||||||||||| | ||| || |||||| || || || |||| ||| || || |
Sbjct 2624 CAGGCCAGATCCTGCGGCTCCAGCTCGCGACCCTCAGGAGTGATCAGGCGATCACCGAGG 2683
Query 4799 AACGAAAAACCGGCCCAAGGGCCGGTTAGGT 4829
|| ||||||||||||||||||||||| ||||
Sbjct 2684 AAAGAAAAACCGGCCCAAGGGCCGGTCAGGT 2714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18506343188160
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