Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_021569.1 Length=7069 Score E Sequences producing significant alignments: (Bits) Value seq1833 3090 0.0 seq1835 2650 0.0 >seq1833 Length=3524 Score = 3090 bits (3426), Expect = 0.0 Identities = 2312/2714 (85%), Gaps = 39/2714 (1%) Strand=Plus/Plus Query 4310 GGCTTCTTCGGTAGCTGTACCGGCGGTGGCAGCTGCCCAACCGCCACGTGGGACGGTGGG 4369 ||||||||||| ||||| || ||||||||||| ||||| || || || |||||||||||| Sbjct 1 GGCTTCTTCGGCAGCTGCACAGGCGGTGGCAGTTGCCCGACGGCAACATGGGACGGTGGG 60 Query 4370 CAGTACGCCGGAAAGTTCGACCTTGGCGCGCTGTGTTCCGGCCCACTGTTACAACTTTTC 4429 |||||||| || ||||| ||||| | | ||||||| || ||||||||| |||| || ||| Sbjct 61 CAGTACGCGGGCAAGTTTGACCTGGCCTCGCTGTGCTCTGGCCCACTGCTACAGCTATTC 120 Query 4430 CAGTACGCCGGGTTTGTGTTTCTTGCGGGCATGGGCATCGTCGCGCTGAGGTGGGCACTG 4489 ||||||||||| || || || ||||| |||||||||||||| |||||||||||||||||| Sbjct 121 CAGTACGCCGGATTCGTCTTCCTTGCAGGCATGGGCATCGTGGCGCTGAGGTGGGCACTG 180 Query 4490 CTATGAAACGCAATCATCTGATCGTGCTTGGCGCTGCGCTACTCGTGCTGGTGCTGTCTG 4549 ||||||||||||| |||||||||||||| | |||||||||||||||||| |||||||| | Sbjct 181 CTATGAAACGCAACCATCTGATCGTGCTGGTCGCTGCGCTACTCGTGCTCGTGCTGTCAG 240 Query 4550 CCTCTTGGGCATATGCCGATGGGGGCGGGCCGGTCACCGCGCTTACCACCTGGGCAAAGG 4609 |||| ||||| ||||||||||||| |||||||||||||| || ||||| |||||||||| Sbjct 241 CCTCGTGGGCCTATGCCGATGGGGTAGGGCCGGTCACCGCCCTCACCACGTGGGCAAAGG 300 Query 4610 AGCAGATCACGTCGCTGTGGGCGGACTTCTCCGACTTCATGACGGACCTACAAACCGACT 4669 | |||||||||||| ||||||| || |||||||| ||||||||||| | || ||||||| Sbjct 301 AACAGATCACGTCGTTGTGGGCTGATTTCTCCGATTTCATGACGGATTTGCAGACCGACT 360 Query 4670 TCATCGAGCTGGCGTTGTCGTTCGTCAAGGCCATCGTGTACCTGATTCCAGCGCCTGATT 4729 |||||||||| | |||||||||| || |||||||||||||||||||| || || |||| Sbjct 361 TCATCGAGCTTGTTCTGTCGTTCGTTAAAGCCATCGTGTACCTGATTCCGGCACCGGATT 420 Query 4730 TCCTGTCCCAGATCAGCTTCTGCGCGATGCTCAACGCCGCGGGGCCGTGGACGGCGTTCA 4789 ||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| || |||| Sbjct 421 TCCTGTCACAGATCAGCTTCTGCGCAATGCTCAACGCAGCGGGTCCGTGGACAGCCTTCA 480 Query 4790 TCGTTGCCCAGTTGCGCGTCGGCGAGGCTATCGCGGTACTGACGGCTGCACTTGTATTCC 4849 |||| |||||| ||||||| ||||| || || || | || || |||||||| | |||| Sbjct 481 TCGTGGCCCAGCTGCGCGTTGGCGAAGCCATTGCACTGCTCACCGCTGCACTCATCTTCC 540 Query 4850 GCCTTGTGCGGGTGTTCCTCACTCTCTTCCAGTGGACGTAACGAAATGATCTTCGGCCAT 4909 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 541 GCCTTGTGCGGGTGTTCCTCACCGTATTCCAGTGGACGTAACGAAATGATCTTCGGCCAT 600 Query 4910 GAAGGCTTGCCGCGCAGCGGCAAGAGCTACGAGGCGGTTCTCCATCACATCCTTCCTGCA 4969 ||||| ||||||||||||||||||||||| |||||||| || ||||||||||| || ||| Sbjct 601 GAAGGGTTGCCGCGCAGCGGCAAGAGCTATGAGGCGGTGCTGCATCACATCCTGCCCGCA 660 Query 4970 TTGCGGGCGAAGCGGCACGTCTACGTGCGCCTAAACGGGGTAGGGGAGAGCCTCGACAAG 5029 |||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct 661 CTGCGCGCAAAGCGGCACGTCTACGTGCGCCTCAATGGGGTAGGGGATAGCCTCGACAAG 720 Query 5030 ATCGCCGCCCACCTGGGCATGCCTGAAGAGGAGGTGCGCGAGCTGGTGCACGTGATGGGC 5089 ||||| || ||||| |||||||| ||||| ||||||||||| || || ||| | |||||| Sbjct 721 ATCGCAGCGCACCTTGGCATGCCCGAAGAAGAGGTGCGCGATCTTGTCCACATCATGGGC 780 Query 5090 GACAAGGAAGTGGTTGACTGGTGCGTATGCGACACCGACAACGATGGCGCCATTTCGTTC 5149 |||| ||| |||||||||||||| || ||||||||||||||||| ||||| || |||||| Sbjct 781 GACAGGGAGGTGGTTGACTGGTGTGTCTGCGACACCGACAACGACGGCGCTATCTCGTTC 840 Query 5150 CCACATATCGAGAAGCACGCACTGATCGTGATCGATGAGGCGCACGAATACTGGCCGACC 5209 || || |||||||| ||||| |||||||||||||||||||| || || ||||||||||| Sbjct 841 CCGCACATCGAGAAACACGCCCTGATCGTGATCGATGAGGCACATGAGTACTGGCCGACG 900 Query 5210 AACCGCGCCAACCTGCCCGAGCGCACTGCAAACTTCTTTGCCAAGCACGGCCATATCAGC 5269 ||||| || ||||| || ||||| || || || ||||| |||||||||||||| |||||| Sbjct 901 AACCGGGCAAACCTACCGGAGCGGACCGCCAATTTCTTCGCCAAGCACGGCCACATCAGC 960 Query 5270 TTGGACATGGTGATCATTTCGCAGGACTGCAAAGACCTGCACCGCCTGATCATCCGCCGC 5329 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 961 TTGGACATGGTGATCATTTCGCAGGACTGCAAAGACCTGCATCGCCTGATCATCCGCCGT 1020 Query 5330 ATGGCGAAGAAGAACACGTATACCAAGCTCGACGCGCTGGGGTCCGATCAGCGGTACTCG 5389 ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| || Sbjct 1021 ATGGCGAAGAAGAACACATATACCAAGCTCGATTCGCTGGGGTCGGATCAGCGGTATTCC 1080 Query 5390 GTGCGGTTCTATGCGGCCACTGGCACCGGCAAATACGAAACGGTGGGCACAGAGGTCCGC 5449 ||||||||||| || ||||| || ||||| ||||||||||| || ||||| || || ||| Sbjct 1081 GTGCGGTTCTACGCAGCCACCGGAACCGGTAAATACGAAACTGTCGGCACGGAAGTGCGC 1140 Query 5450 AAGTACGATCCGGCCATCTGGGAGCTCTACCACGGCGTACAGCCGGGCATTGAGTCCAAT 5509 ||||||||||| || ||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct 1141 AAGTACGATCCCGCAATCTGGGAGCTTTACCACGGCGTGCAGCCTGGCATTGAGTCAAAT 1200 Query 5510 GAGGTCTACAAGGGAAACACGCGCACTTTGTGGAAGACCCTGCGCGGCCCATCAATCGTA 5569 |||||||||||||| ||||||||||| | |||||||| ||||||||||| ||||| | Sbjct 1201 GAGGTCTACAAGGGCAACACGCGCACCCTCTGGAAGACTCTGCGCGGCCCGTCAATTCTG 1260 Query 5570 ATGGGCCTCGCACTTGTCATTGGCGTGGTGATGTTCCTGCGGTTCTTCTTCGCAGACGGC 5629 |||| || || ||||| | |||||||||||| | ||||||||||||||| | ||| Sbjct 1261 ATGGCGCTTGCGCTTGTGGTCGGCGTGGTGATGCTGGGGCGGTTCTTCTTCGCCGGAGGC 1320 Query 5630 TCAACGGGGGAGGAAAGCAAGCTCAAGGAGGTTGTCAAGACGCAGAAGGCCGCAATTCCC 5689 | || |||||| ||||||| ||||| |||||| | | |||||||| || |||||| Sbjct 1321 ACCACCGGGGAGACCGGCAAGCTGAAGGATGTTGTCGCGTCACAGAAGGCTGCTATTCCC 1380 Query 5690 GCGATAGCGCACGCGCCGGGTGCTCAGCCGGCCACGGTGGTCACAAAGGTTGTCGAGACG 5749 || ||||||||||||||||| | || ||| |||| |||||||| | ||||| |||| || Sbjct 1381 GCCATAGCGCACGCGCCGGGCACGCAACCGTCCACAGTGGTCACGACGGTTGCCGAGGCG 1440 Query 5750 CCCAAGACGAAGGAGAAGCTTCCTGCGGGCGTTCAGTACATTCTGGACATGGCGGCCAAT 5809 || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1441 CCTAAGGCGAAGGAGAAGCTTCCTGCGGGCATTCAGTACATTCTGGACATGGCGGCCAAT 1500 Query 5810 GCCAGGGCGAGGCACGCCGGGTGGTATGGCCAGCGCGACATCGTGGAGTTTCGCGCGTCA 5869 ||||||||| | ||||| || ||||| ||||| ||||| || |||||||| ||||| ||| Sbjct 1501 GCCAGGGCGCGACACGCAGGCTGGTACGGCCACCGCGATATTGTGGAGTTCCGCGCATCA 1560 Query 5870 GGCGGCGGGCAAGTACTCGACCGATTCACCACTGAGCAGCTGTGGGCGCTGGGCTGGTCT 5929 ||||||||||| || |||||||| |||||||| || ||| ||||||||||||| |||||| Sbjct 1561 GGCGGCGGGCAGGTTCTCGACCGCTTCACCACGGAACAGTTGTGGGCGCTGGGGTGGTCT 1620 Query 5930 GTCAAGCGAACCGAATTCGGCGTGTTACTGAGCGCTAAGGGGCATGAGATTATCGCCACG 5989 ||||| || ||||| ||||| ||| | |||||||| ||||| || ||||| ||||| || Sbjct 1621 GTCAAACGGACCGAGTTCGGTGTGCTGCTGAGCGCCAAGGGCCACGAGATCATCGCGACT 1680 Query 5990 ACTTGGCCCGTGGACCCGTTTGGCGAGCAGTCCGATGCTACGACCGCGCGCATAAAGGCT 6049 ||||||||||| || || || ||||| || |||||| | || |||| ||| |||| |||| Sbjct 1681 ACTTGGCCCGTTGATCCCTTCGGCGAACAATCCGATTCGACTACCGAGCGTATAAGGGCT 1740 Query 6050 GCGGCGGGGTCGCCTGTGACGAGCGCGAGCGAGACACAGCCGACCACCGCCGCGGCGAAC 6109 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1741 GCGGCGGGGGCGCCTGTGACGAGCGCGAGCGAGACACAGCCGACCACCGCCGCGGCGAAC 1800 Query 6110 GGGAGCACCCTAATTGCAGTTGGGAAGCGCCCCTTGGGCACGTTCCCAGAGACGCCGCCA 6169 ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||| Sbjct 1801 GGGAGCACCCTGATTGCAGTTGGGAAGCGCCCCATGGGCACATTCCCAGAGACACCGCCA 1860 Query 6170 TACCCGGCGAGCTTCTGATTTTCGTAATGGGATACCATGCCCCCGAACCTTGGGGGCGAA 6229 || ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 1861 TATCCGGCGAGCTTCTGATTTTCGCAATGGGATACCATGCCTCCGAACCTTGGGGGCGAA 1920 Query 6230 ATGGGCATTCGATCAGGCCTAGTGCTGGCTCTACTGCTGCTGTGGGCACCTGCGCATGCG 6289 |||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||| || Sbjct 1921 ATGGACATTCGATCAGGCCTAGTTCTGGCTCTACTGCTGCTGTCGGCACCCGCGCATTCG 1980 Query 6290 CAACAACTACGCTCGGCCACTGGTCCACAGCCACCGCCCAGGTACACGCCGCCAACACCG 6349 |||||| |||| || ||||| || || |||||| |||||| ||||||||||||||||||| Sbjct 1981 CAACAAATACGATCAGCCACCGGCCCGCAGCCAGCGCCCACGTACACGCCGCCAACACCG 2040 Query 6350 AAGGTGAGCAACCTTGGCGCTGAGCCGCTGAAATGCCAGCAACACCTTGATCCGCGCATC 6409 |||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct 2041 AAGGCGAGCAACCTTGGCGCTGAGCCGCTGAAATGCCAGCAACACGTCGATCCGCGCATC 2100 Query 6410 CGGCTCTATTGCGCGGAAATTGAGCGATCCCTGATACAGGGCGAGGCGCGTCGCCAAGGG 6469 || ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 2101 CGCCTCTATTGCGCGGAAATCGAGCGATCACTGATACAGGGCGAGGCGCGTCGCCAAGGC 2160 Query 6470 TTACCAACGCCATCGAGCGAGATTGTTCGCATGCCAGCCTACGGGAGCGCCGAGGCAAAG 6529 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2161 ATACCAACGCCATCGAGCGAGATTGTTCGCATGCCAGCCTACGGGAGCGCCGAGGCAAAG 2220 Query 6530 CAGCTGGGCGCTGCCTGTATGGGGGGCACCGCAATGCGCCGCCTAAACAACGGCTGGGAA 6589 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2221 CAGCTGGGCGCTGCCTGTATGGGGGGCACCGCAATGCGCCGCCTAAGCAACGGCTGGGAA 2280 Query 6590 CAGTTGCGAAACGCCAAGGGCGAATGGCTGCGCTGCCGTGAGCACTGAACCGGGGTGTAG 6649 |||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 2281 CAGTTGCGGAATGCCAAGGGCGAATGGCTGCGCTGCCGCGAGCAATGAACCGGGGTGTAG 2340 Query 6650 GGGCAGCGCCCCTACGGAAGCGCCTCACACGCGCTGGTAAGGTCTCGGCCCCGGCGCCGG 6709 ||||||||||||||||||| ||| ||||||||||| | | | |||||||| |||| Sbjct 2341 GGGCAGCGCCCCTACGGAAACGCTTCACACGCGCTCGCGGCGCTTTGGCCCCGGTTCCGG 2400 Query 6710 CAGGACACCCGCAACAGGATCGGCGTCAGGACCAGCCATCACCGTGGAAGACCGCTTTGC 6769 ||| | | || | || |||||||| || ||||||||| || | || |||| | Sbjct 2401 TAGGTCTGCTGCGGCTGGCTCGGCGTCGGGTCCAGCCATCGCCACCGCCGAACGCTGTTT 2460 Query 6770 GCGGCGTTGTGCGACCTCGGCCAGGTCAACGA---TGCCCGCACGC--CCGAATG--GCC 6822 ||| | | | || || ||| | |||| || | | |||| |||||| | | Sbjct 2461 GCGTTGGCTTACAACATCCCGCAGATTGACGACAGTGGCAGGACGCTGGCGAATGCCGGC 2520 Query 6823 GT--------------TTCT--------------GAC----CACCTCGGGCAATCTCCAT 6850 || |||| ||| | | |||||| ||||| Sbjct 2521 GTCGCGATTGCGTACATTCTTGGAACTGTCGATCGACGGCGCCGCACGGGCAGCTTCCAT 2580 Query 6851 CATCCGGCGCCATTCCTGCGCCTGTGCGGCCAGCAGGGACAGCCATGCAAGGTCCTGCGG 6910 ||||||||||||||||||||| || ||| || |||||||| || || |||||||| Sbjct 2581 CATCCGGCGCCATTCCTGCGCTTGGCAGGCGGTGAGCGACAGCCAGGCCAGATCCTGCGG 2640 Query 6911 TTCCAGCTCGCGGCCTTCGGGGGTGACCAGTCGGCCAGCCTTAAACGAAAAACCGGCCCA 6970 ||||||||||| || || || |||| ||| || || | || |||||||||||||| Sbjct 2641 CTCCAGCTCGCGACCCTCAGGAGTGATCAGGCGATCACCGAGGAAAGAAAAACCGGCCCA 2700 Query 6971 GGGGCCGGTTAGGT 6984 |||||||| |||| Sbjct 2701 AGGGCCGGTCAGGT 2714 >seq1835 Length=3957 Score = 2650 bits (2938), Expect = 0.0 Identities = 1965/2310 (85%), Gaps = 7/2310 (0%) Strand=Plus/Minus Query 1054 CAATGGTCGGTGATCGCGCGGTGCCGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGGAG 1113 |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 2314 CAATGGCCGGTGATCGCACGGTGCTGGCCGGGTCGGGACTCCCCTCGTCTAACAGGGGAG 2255 Query 1114 TCAGTGAATTCAGGAACCCCGAGGGAACCCTGACGGTCGGCATTGATTGGTTCTCCGCTT 1173 ||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 2254 TCAGTGAATTCAGGAACGCCGATGGAACCCTGACGGTCGGTATTGACTGGTTCTCCGCTT 2195 Query 1174 CCATCGATCTGCGCGCAGCGCTGGACGAGGTCGCATTCCGTGATGGCGACAGTTTCGAAG 1233 |||||||||||||||||||||||||||| | || ||||||||||||||||| ||||||| Sbjct 2194 CCATCGATCTGCGCGCAGCGCTGGACGAACTTGCGTTCCGTGATGGCGACAGCTTCGAAG 2135 Query 1234 AGGTCCGCCAGTGGATCGAGTTCTCCCCGGAAAACGCACGTGTTGCGGCCCTGCAGGTGT 1293 ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| Sbjct 2134 AGGTCCGCCAGTGGATCGAGTTCTCCCCGGAGAACGCACGTATCGCGGCCCTGCAGGTGT 2075 Query 1294 TCTGCTGGTTCTTCGCTGGGCTGGGCCTTGAACTGGATGAAGCAGCAGGCGGCGGTCGCT 1353 |||||||||||||||||||||| |||||||||||||||||| |||| || || ||||||| Sbjct 2074 TCTGCTGGTTCTTCGCTGGGCTTGGCCTTGAACTGGATGAAACAGCCGGTGGTGGTCGCT 2015 Query 1354 TCTACATGTGGCGAATCAAGATCATCGACGCGGCCAAGAAGTTCGTCGGGATGATCGAAC 1413 |||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2014 TCTACACGTGGCGTATCAAGATCATCGACGCGGCCAAGAAGTTCGTTGGCATGATCGAAC 1955 Query 1414 TGGGCGGCGAAAAGTGCCGCCGCGCCGATGGCACATATACCGCCCGCATCGAGCTAACCG 1473 ||||||| || | ||||||||||| |||||||| ||||||||||||||||| || |||| Sbjct 1954 TGGGCGGTGAGGAATGCCGCCGCGCGGATGGCACGTATACCGCCCGCATCGAACTGACCG 1895 Query 1474 GTGATGGATGCAAAGCGATAGGCGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGAGC 1533 | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1894 GCGATGGATGCAAGGCAATAGGCGCAGCGCGCTGCGGCCATGCGCAGCGGTGGCTGGAGC 1835 Query 1534 TTCGAGCGAAGCTCGAAAGCTGCGCCGGAAGGATCACCCGCGTCGACGTGTGCGCAGATG 1593 ||||||||||||||||||||||||||| |||||||||||| || ||||| || || |||| Sbjct 1834 TTCGAGCGAAGCTCGAAAGCTGCGCCGCAAGGATCACCCGTGTTGACGTCTGTGCCGATG 1775 Query 1594 ATCTGATCGGTGAATACCCATTGCGCCTGGCGCAGAAGTGGTACGCAGCTGGTGAGTTCG 1653 | || | || ||||||||||||||||| |||||||||||||||| | || |||||| Sbjct 1774 ACTTGGTGGGCGAATACCCATTGCGCCTCGCGCAGAAGTGGTACGAGGAAGGCGAGTTCA 1715 Query 1654 ATAACCGTGGCCAGCGCCCTAAGGCGCAGCTGGTGGACGACTACGACAGCGGCGACGGCA 1713 | || || || |||||||| || || |||||||||||||||||||||||||| ||||||| Sbjct 1714 ACAATCGCGGTCAGCGCCCCAAAGCACAGCTGGTGGACGACTACGACAGCGGTGACGGCA 1655 Query 1714 AGACGCTCTACATCGGCGGCAAGAAGTCGGAGAAGCAGCTGCGTGTGTATGAGAAGGGCA 1773 ||||| |||| |||| |||||||||||||| ||||||||||| || || |||||||||| Sbjct 1654 AGACGTTCTATGTCGGTGGCAAGAAGTCGGAAAAGCAGCTGCGCGTCTACGAGAAGGGCA 1595 Query 1774 GAGAGCAGGGCGACAAGAGCTCTCCGTGGGTGCGCTATGAGGCTCAGTTCCGCAACTCAA 1833 | ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| | Sbjct 1594 GGGAGCAGGGCGACAAGAGTTCGCCGTGGGTGCGCTATGAGGCGCAGTTCCGCAACTCCA 1535 Query 1834 ACCGCAAGGAACTGCCCCTCGACATTCTGCGGGATCCGGCCTCCTACCTGCTCGGCGCCT 1893 |||||||||||||||| |||||||||||||| |||||||| || |||||||| || || | Sbjct 1534 ACCGCAAGGAACTGCCGCTCGACATTCTGCGTGATCCGGCGTCTTACCTGCTGGGTGCTT 1475 Query 1894 ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGCGCATCGAAATCACGAAAGCCGCTG 1953 || |||||||||||||||||||||||||| | Sbjct 1474 ATCCAGTCCTGTCCTTTCTGCGGTGCGTTGCTACGCGCATCGAAATCACGAAAGCCGCCG 1415 Query 1954 TCGAGGCCACGTGGAAGAGCGTACGTCGCCATATCCGCCGCCAGTACGGCGCGGCCCTCA 2013 | || || |||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1414 TTGAAGCGACGTGGAAGAGCGTTCGTCGCCACATCCGCCGCCAGTACGGCGCGGCCCTCA 1355 Query 2014 ATTTCATCGCCAAGAACTGCCCAGACGATCAGGCATTGCGGGCGGTAATCGAATCCTGCA 2073 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1354 ATTTCATCGCCAAGAACTGTCCTGACGATCAGGCATTGCGGGCGGTAATCGAATCCTGCA 1295 Query 2074 CTTCGCCATCGCTGCCGAAGTGGGTAACAGGTGACACAGCAGCGCATTGGCCCGAAATCG 2133 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1294 CTTCGCCATCGCTGCCGAAGTGGGTCACAGGTGACACAGCAGCGCACTGGCCCGAAATCG 1235 Query 2134 CGGCCGTACAACCAACCTCAAAGGGGTAATG--AAATGA---TCAAGGTCATCGTACTGG 2188 |||||||||| |||||||||||||||||| | |||| ||||| ||| ||| || Sbjct 1234 CGGCCGTACAGCCAACCTCAAAGGGGTAACAGCACATGAGCATCAAGATCACCGTCCTCA 1175 Query 2189 ATTCGCAGATCAACGAGCGTGGCGGCAGCTTCACCAACGACCGCAACGAGAACGTTGAAT 2248 | | ||| | || || | ||||||||||| || ||| ||| |||| | | Sbjct 1174 AGAGCGAAATCGATGAACGCGTCGGCAGCTTCAAGAATGACAAGGGCGAAGACGTCAAGT 1115 Query 2249 TCACCACCCGCAAGCAGCGCGCCAAGCTGGAGGCGGACGGTTTCGCCTATCCGTTCGACG 2308 ||||||| ||||||||| ||||||||||| | | || ||||||||||| || |||| Sbjct 1114 TCACCACTCGCAAGCAGAAGGCCAAGCTGGAAACCGCAGGCTTCGCCTATCCATTTGACG 1055 Query 2309 TGCGCCTGGACAAGGGTCAGTCGGGCTATCCGGCGGGCGAGTACGAGCTCGACGTCCCGG 2368 |||||||||| | |||||| ||||| || | ||||||||||||||||| || Sbjct 1054 TGCGCCTGGAGGATGGTCAGAGCGGCTACCCCGAAGGCGAGTACGAGCTCGATGTTGATT 995 Query 2369 CCATGCTGCAGGTCAATAAGGGCGTTGCAACCCTGAGCAAGTTCACGATCCTGCGCCCGC 2428 ||||| |||||||||| |||||||| || | |||||||||||||| | |||||| | Sbjct 994 CCATGTTGCAGGTCAACAAGGGCGTCGCCTCGCTGAGCAAGTTCACCGTTCTGCGCATGG 935 Query 2429 TGCAGAAGGCTGCGCCGCGCCCGGCAGCGCAGGCCTAAGTCATGGCCGTGTGCGTGTCTC 2488 ||| ||| | || || ||| | || || |||||||||||||||||||| |||||||||| Sbjct 934 TGCCCAAGCCCGCACCCCGCGCAGCCGCTCAGGCCTAAGTCATGGCCGTTTGCGTGTCTC 875 Query 2489 TGACGGCTGAGGGGACGCTTGTACCCACCGGGGAGCCTGCATCGCAGTGTGGTGGGTATG 2548 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 874 TGACGGCTGAGGGGACGCTCGTACCCACCGGGGAGCCTGCATCGCAGTGTGGTGGGTATG 815 Query 2549 TGCTTGTGTCGGCGGCAGAACACGCACAGGCCTCAATCCTCATCGATCTATTCCAGTGGC 2608 |||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||| Sbjct 814 TGCTGGTGTCAGCGGCAGAGCACGCGCAGGCCTCAATTCTCATCGATCTATTCCAGTGGC 755 Query 2609 CCGAACCGGAAGTGGCCACTGGTTGGTTCTCGGGGGTGTTCACGCTGGTGCTCGCACTGA 2668 ||||||| || ||||| |||||||||||||||||||| |||||| |||| || ||||||| Sbjct 754 CCGAACCCGAGGTGGCTACTGGTTGGTTCTCGGGGGTTTTCACGTTGGTTCTTGCACTGA 695 Query 2669 ACGTGCTGGGCTACATCGTGGGCGCCGTCGTGAAGTCGGTCAGTACAGAGCGGGATTGAC 2728 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 694 ACGTGCTCGGCTACATCGTGGGCGCCGTCGTGAAGTCGGTCAGTACAGAACGGGATTGAC 635 Query 2729 CACCCCATCTAACGCGCACANNNNNNNNNNCA-AAGGAGCAGTGCAATGGACTTCGGCGA 2787 || ||||||| |||||| | || |||||||||| ||||||| |||| | Sbjct 634 CA-CCCATCTCTCGCGCAAATAGCGCATCACAGAAGGAGCAGTTCAATGGATTTCGACAG 576 Query 2788 CATTCTGACCGGCCTCGCAGCCGCCAGCGCAGTCAGCGCAATCATCAGCGCAGGTGCCAT 2847 ||| ||||||||||||||||| |||| || || | ||| |||||| | ||||||||||| Sbjct 575 CATCTTGACCGGCCTCGCAGCCACCAGTGCGGTTACCGCCATCATCGGTGCAGGTGCCAT 516 Query 2848 CAAGGCATCCCCGGGCTTCGCCCGCTGGGCGACCAACAAGGTCGCCACCTTCTTCCGCTG 2907 |||||| |||||||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct 515 CAAGGCGGCCCCGGGCTTTGCCCGGTGGGCGACCAACAAGGTCGCGACCTTCTTCCGCTG 456 Query 2908 ATCGCGGGAGAATTGTGACGGGGAGGGGCTGGGAAACCGGCCCCGATTCCTATGCAGACA 2967 ||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 455 ATCGCGGAAGAATCGAGACGGGGAGGGGCTGGGAAACCGGCCCCGATTCCTATGCAGACA 396 Query 2968 CAGCCCGATGACGTGAGCGCCGATGAGTGCCAGGACGATTGGTGCCCAGAGTGTGGTGGC 3027 |||||||||||| | | | |||| || | ||||||||| ||||| || ||||| || || Sbjct 395 CAGCCCGATGACTTCAACACCGACGAATACCAGGACGACTGGTGTCCCGAGTGCGGCGGT 336 Query 3028 GATGACGTGATCGTGTTGGACGACGGCAATCTGTGGTGCACGGAGTGCCGTGCCGTCGTT 3087 ||||||||||||| ||||||||||||| | || ||||||||||||||||| |||||| | Sbjct 335 GATGACGTGATCGCGTTGGACGACGGCGAACTATGGTGCACGGAGTGCCGCGCCGTCATC 276 Query 3088 GACTACTAGGGGCGGGTGATGGATTTCAGTGGGGTGTTCCTCGGGCTATCCGTCGCACAG 3147 || ||||||| || | ||||||||||||||||||| || |||||||| ||||| || ||| Sbjct 275 GATTACTAGGAGCTGATGATGGATTTCAGTGGGGTTTTTCTCGGGCTGTCCGTTGCTCAG 216 Query 3148 GTGGTGGCAGCAATTGTTGGTGCCGGCACCTTGATGGCGCTCCCTTGGTTCGGACGATGG 3207 | || || || || |||| || || || | |||||||| || ||||| || || ||| Sbjct 215 GCTGTCGCTGCGATCGTTGCAGCGGGGACGCTCATGGCGCTTCCGTGGTTTGGCCGTTGG 156 Query 3208 TGTGTCGACAAGATCGCAGGATTCTTTGAGGACCGCGAGGACCAGGACGCNNNNNNNNNN 3267 || || ||||||||||| || |||||||||||||| ||||| |||||||| Sbjct 155 TGCGTTGACAAGATCGCGGGCTTCTTTGAGGACCGGGAGGATCAGGACGCCGACGAGCAT 96 Query 3268 NNNNNNNNTGAGGCGGGAGAGGTTGAAGAGGTCGTGTGCGCTGACACCGGCCATGACTAT 3327 |||||||| |||||||| |||| ||| || | ||||||||||||||||| Sbjct 95 GCCGACGAAGAGGCGGGCGAGGTTGAGGAGGCCGTCTGTGGCGACACCGGCCATGACTAC 36 Query 3328 GACGGTGGCGAGTGCATCTTCTGCGGCCAA 3357 ||||| || ||||||||||||||||||||| Sbjct 35 GACGGCGGGGAGTGCATCTTCTGCGGCCAA 6 Score = 897 bits (994), Expect = 0.0 Identities = 596/656 (91%), Gaps = 8/656 (1%) Strand=Plus/Minus Query 1 AACATAATATACATACCGCCGTTGTCGGCAGCGCTAACCGCCTGAATTTGGGCGGTTTTT 60 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 3277 AACATAATATACATACCACCGTTGTCGGCAGCGCTAACCGCCTGAATCTGGGCGGTTTTT 3218 Query 61 GCGTTTGCTAGACCTGGCATCGACAGCGCTACCAGCGCGACGACCGCAGCCGCCGCGCTC 120 |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3217 GCGTTTGCGAGACCGGGCATCGACAGCGCTACTAGCGCGACGACCGCAGCCGCCGCGCTC 3158 Query 121 ATTCTGTCCAGCATGAGGCGCCAGAGGGCCCGCTCGGTTGCCGACGTGGCGCGCTCGGCA 180 ||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct 3157 ATTCTGTCCAGCATGAGGCGCCATAGGGCCCGTTCGGTTGCAGACGTGGCGCGCTCGGCA 3098 Query 181 TGGATCATCGCGATCCAGGTGGGGCCGTCCAGCTTCGCAAGGGCGCAAATCTGCGCAATT 240 |||||||| |||||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct 3097 TGGATCATGGCGATCCACGTGGGGCCATCCAGCTTCGCCAGCGCGCAAATCTGCGCAATT 3038 Query 241 CGCTCATCGGCCAGCGGCGTATCGCCTTTCCTCCAGCGGGACACCAGCGACCGGGTCACG 300 |||||||||||||||||||| ||||| |||| |||||| || |||||||||||||| || Sbjct 3037 CGCTCATCGGCCAGCGGCGTGTCGCCCTTCCGCCAGCGAGATACCAGCGACCGGGTAACA 2978 Query 301 GTCAGCCTTTCAGCCAAAGCCATATCGGACGCGAGATTCAAGCGAATTTTCACGTTGTCA 360 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2977 GTCAGCCTTTCAGCCAAAGCCATATCGGACGCGAGATTCAAGCGACTTTTCACGTTGTCA 2918 Query 361 AGTAGTTCGTTGACGGCGGTCATGGCGGCTCCAGTTGATCGATCAGTTGACACGTGTTTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2917 AGTAGTTCGTTGACGGCGGTCATGGCGGCTCCAGTTGATCGATCAGTTGACACGTGTTTC 2858 Query 421 CCGATCAGTTTACATGCGCCTCGTTGAGTGATCACTCAACACCCGCCACCGGCACCCCAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2857 CCGATCAGTTTACATGCGCCTCGTTGAGTGATCACTCAACACCCGCCACCGGCACCCCAA 2798 Query 481 GGCCGCTGGCGGGTTCTCTTGGGGCTTGGGGCAGGGGATCACGGATGTTCGACGCCATCT 540 |||||||||||||||||||||||||||||||||||||| || ||||| |||| || | | Sbjct 2797 GGCCGCTGGCGGGTTCTCTTGGGGCTTGGGGCAGGGGAGCAGGGATGATCGAT-CCGT-T 2740 Query 541 CAT--CCTTCGCGCTGCTGGGAGCCATTGCGGCTATCTCCATTGGTGCCGCTCGTATCGT 598 ||| |||||| |||||||| ||||| | ||| | |||||||| ||| |||| Sbjct 2739 CATTGCCTTCGTGCTGCTGGCGGCCATCGTGGCCGTATCCATTGGCAGCGCCAAACTCGT 2680 Query 599 TTCGTGGCTGCTCGACCGGCGTGACTACACCGCC--TCGCAGCAGTCACGCGAAGC 652 ||||||| ||||||||||||| | ||||| ||||||| ||| |||||| Sbjct 2679 TTCGTGGTGCCTCGACCGGCGTGGGGAGTCCGCCCGTCGCAGC--GCACACGAAGC 2626 Score = 82.4 bits (90), Expect = 3e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 673 AGGCGGAGATTGCCGCCACCAAGCGCGGCGATCTGCTGGCCGCCGCTCGCTACGCCGAAC 732 |||| || || || |||||||||||||| ||||||||| |||||||||||||||| ||| Sbjct 2554 AGGCCGAAATCGCGGCCACCAAGCGCGGTGATCTGCTGACCGCCGCTCGCTACGCAGAAG 2495 Query 733 AGCACGAG 740 |||| ||| Sbjct 2494 AGCAGGAG 2487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22502527310432