Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_027636.1 Length=4501 Score E Sequences producing significant alignments: (Bits) Value seq38275 80.6 8e-12 >seq38275 Length=543 Score = 80.6 bits (88), Expect = 8e-12 Identities = 116/163 (71%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 461 TATAACTTGATCTGGAATCAGTGGTTCCGTGATGAGAATTTGCAGAATTCTGTTCAGATT 520 ||||| ||||| | ||| ||||||| |||||| ||||| | ||| | | |||| || Sbjct 328 TATAATTTGATTTATAATGAGTGGTTTCGTGATCAGAATCTTCAGGAGTTGGTTCCTTTT 269 Query 521 GACAATGGTGATGGGCCTGACAATCCGGTTAACTACAATTTGTGTCGGAGGGGTAAGCGT 580 || |||||||||| || || || || | | || || | | ||| |||||||| Sbjct 268 GATGATGGTGATGGTCCAGATAAGGTGGATGATTATAA---GCATTTGAGACGTAAGCGT 212 Query 581 CATGATTATTTCACGTCGTCGCTTCCATGGCCGCAGAAGGGTG 623 ||||||||||| || || | ||||| | || ||||| |||| Sbjct 211 CATGATTATTTTACTTCTGCTCTTCCTTCTCCTCAGAAAGGTG 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14283922519020