Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq463 96.9 1e-16 >seq463 Length=577099 Score = 96.9 bits (106), Expect = 1e-16 Identities = 55/56 (98%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 2419 CATAATTCAAACtttttttCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGCTTC 2474 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 71421 CATAATTAAAACTTTTTTTCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGCTTC 71366 Score = 87.8 bits (96), Expect = 6e-14 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 2388 TTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTCAAACtttttttC 2438 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 71412 TTTAATTATGTTTCAGACTTTTATTTCTCGCCATAATTCAAACTTTTTTTC 71462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17119974577730