Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_006555.1 Length=5039 Score E Sequences producing significant alignments: (Bits) Value seq797 93.3 1e-15 >seq797 Length=45956 Score = 93.3 bits (102), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 2236 CCTAGTGCTGGTAAAAATTATTTTATAGACGCTATATTGTCCTTTTATTTGAATACTGG- 2294 |||||||| || || ||||||||||| || || | || | | ||| || ||| ||| Sbjct 6268 CCTAGTGCAGGCAAGAATTATTTTATTGATGCGGTTTTATGTTATTACTTTAATTTTGGT 6327 Query 2295 -AATTATATTAAACTTTAATAGATTTAGTCAATTTCCACTTATGGAAGCTGTTAATAGAC 2353 || || || ||||||||| | || | ||||| || || ||||||||||| Sbjct 6328 CAAATACAT--GACTTTAATAAACAATGTAATTTTCCTCTACAAGATTGTGTTAATAGAC 6385 Query 2354 GTGTAAATGTATGGAATGAACCTAATTTTGAACCTGCAGCTTTAGACACCATAAAAATGT 2413 |||| | ||||| ||||| |||||||||||||| || ||| || ||||||||| Sbjct 6386 GTGTTCTTTACTGGAACGAACCGAATTTTGAACCTGCCGCCACAGAAACTTTAAAAATGT 6445 Query 2414 TGTTAGCTGGTGAT 2427 | |||| |||||| Sbjct 6446 TATTAGGAGGTGAT 6459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16011560534220