Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_001954.1 Length=8454 Score E Sequences producing significant alignments: (Bits) Value seq16149 141 5e-30 >seq16149 Length=7116 Score = 141 bits (156), Expect = 5e-30 Identities = 123/150 (82%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 6697 TCAAAGTCAGCAGCGGGTACGGTCAGC-CAGCCGGGGCGCAATGTCCGGGCAAAATCAGG 6755 |||||||||||| || |||| ||| |||| | | || ||| || |||||||| Sbjct 1583 TCAAAGTCAGCAAAAGGCACGG-CAGAGCAGCACTCGTGGAAGGTCAAAGCCAAATCAGG 1525 Query 6756 TTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGAGTACAA 6815 || |||||||||||||| ||||| || |||||||||||||||| |||||||||||||| Sbjct 1524 CTTGAACCGTTCGATACTCGATCAAGGTTGGTATGAAATGCGCCATCAGCTTGAGTACAA 1465 Query 6816 ACAGCTCTGGCGTGGAGGTCAGGTGCTTGC 6845 ||||||| |||| ||||||||||||||||| Sbjct 1464 ACAGCTCCGGCGCGGAGGTCAGGTGCTTGC 1435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26931698746296