Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_004287.1 Length=5078 Score E Sequences producing significant alignments: (Bits) Value seq22 82.4 2e-12 >seq22 Length=1795402 Score = 82.4 bits (90), Expect = 2e-12 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 2191 TAGTAAGTCCACCTAGCGCAGGAAAAAACTTTTTTATAGAAACAGTACTTGCATTTTATT 2250 |||| ||||| || || | ||||||||||| ||| | || | || | || ||||||| Sbjct 1030743 TAGTTAGTCCTCCCAGTGGAGGAAAAAACTACTTTTTTGATGCTATAATGGCTTTTTATT 1030684 Query 2251 GGAACACTGGGGTCATTCAAAATTTTAACCGATACAACAATTTCCCGTTAATGGAAGCTG 2310 |||| ||| | ||||| ||||| ||| || |||||| || || || ||||| || Sbjct 1030683 TGAACGTTGGAATAATTCAGAATTTCAACAAATTCAACAACTTTCCCTTGATGGAGGCCA 1030624 Query 2311 TTAATAGAAGAGTAAACTATTGGGATGAACCAAACTTTGAACC 2353 | ||| | ||| | || | |||| | || || ||| | ||||| Sbjct 1030623 TCAATCGCAGAATCAATTGTTGGAACGAGCCCAACGTGGAACC 1030581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16137283350030