Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_015718.1 Length=4926 Score E Sequences producing significant alignments: (Bits) Value seq22 89.7 2e-14 >seq22 Length=1795402 Score = 89.7 bits (98), Expect = 2e-14 Identities = 183/270 (68%), Gaps = 8/270 (3%) Strand=Plus/Minus Query 2032 TAATTAGCCCTCCTTCTGCCGGTAAAAACTTTTTATTAGATGCTATATTTGCATTCTATT 2091 || |||| ||||| || || ||||||| || || ||||||||| | || || |||| Sbjct 1030743 TAGTTAGTCCTCCCAGTGGAGGAAAAAACTACTTTTTTGATGCTATAATGGCTTTTTATT 1030684 Query 2092 GGAACGTTGGTATGATTAGGAACTTTAACAAGTATGAATCTTTTCCTTTAATGGAAGCGG 2151 ||||||||| || ||| ||| || ||||| | | ||||| || ||||| || Sbjct 1030683 TGAACGTTGGAATAATTCAGAATTTCAACAAATTCAACAACTTTCCCTTGATGGAGGCCA 1030624 Query 2152 TAGACAAGAGAGTTAATTGTTGGAATGAACCAAACTTTGAACCTTCAGCTGAAGATACCA 2211 | | ||| | ||||||||||| || || ||| | ||||| || || || Sbjct 1030623 TCAATCGCAGAATCAATTGTTGGAACGAGCCCAACGTGGAACCGAGCGCGTTTGACACTG 1030564 Query 2212 TCAAGATGATCTTAGGTGGAGATCCGATCAAAGCTGCATACAAATATGAAAGCGAACGCA 2271 | |||||| | | | ||||| ||| | |||||||| ||||| || ||| || Sbjct 1030563 TGAAGATGTTGCTCGCCGGAGACCCGTTGAAAGCTGCGGTAAAATACCAATCGGAA--CA 1030506 Query 2272 AC----ATTGCTAGAACACCTGTAATTGTA 2297 || |||| |||||||||||||||||| Sbjct 1030505 ACCCTTATTG--AGAACACCTGTAATTGTA 1030478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15650892894110