Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq59101 127 8e-26 >seq59101 Length=1791 Score = 127 bits (140), Expect = 8e-26 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 6129 TTATCAGCTAGAACGGTTGAATATCATATTGATGGTGATTTGACTGTCTCCGGCCTTTCT 6188 |||||||| | | ||||||| | | ||| ||||||||||||| || | || || || Sbjct 702 TTATCAGCACGTGCTGTTGAATTTGAGATTAATGGTGATTTGACGGTTACAGGGCTGACT 643 Query 6189 CACCCTTTTGAATCTTTACCTACACATTACTCAGGCATTGCATTTAAAATATATGAGGGT 6248 || || ||||| ||||| || ||||||||| | | || | ||| | |||| |||| Sbjct 642 CATCCGTTTGATTCTTTGCCCACACATTACAGCTGGTTAGCGATGAAAGTTTATGCGGGT 583 Query 6249 TCTAAAAATTTTTATCCTTGCGTTGAAATAAAGGCTTCTCCCGCAAAAGTATTACAGGGT 6308 ||| ||| | || ||||| ||| | ||||| ||||| ||||| | |||| ||| Sbjct 582 TCTTTCAATCGGTTCCCGTGCGTGGAACTTAAGGCATCTCCGGCAAAGCTGCTACAAGGT 523 Query 6309 CATAATGTTTTTGGTACAACCGATTTAGCTTTATG 6343 ||||||||||| |||| |||||||| ||||| || Sbjct 522 CATAATGTTTTCGGTAGCACCGATTTGGCTTTGTG 488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20371865945908