Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_023421.1 Length=1378 Score E Sequences producing significant alignments: (Bits) Value seq220 100 2e-18 >seq220 Length=254280 Score = 100 bits (110), Expect = 2e-18 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 624 CTACTACAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGGACGTGATCCT 683 |||||||||||||||||| || ||||||||||||||| |||| ||| ||| | Sbjct 10859 CTACTACAAACCACGCGGAGACTGGTGGGACGGATACCAACAACAAACTTGCGTCATCAT 10800 Query 684 GGATGATTTCTACGGCTGGTTGAAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCC 743 || || |||||||| ||| | |||| ||||||||| | |||||||| ||||| ||||| Sbjct 10799 CGACGACTTCTACGGATGGATAAAGTACGACGAACTCCTAAAAATATGCGACCGCTACCC 10740 Query 744 GTA 746 || Sbjct 10739 CTA 10737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4300500417024